RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 PPYP01298 95 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 HLA-DRB1P01911 266 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 APOA2P02652 100 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 FCGR2CP31995 323 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 RCVRNP35243 200 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 MRPS10P82664 201 aaKnown RBP11.36□□□□□ -0.59
COL3A1-203ENST00000450867 MMDQ15546 238 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 C5orf64Q2M2E5 130 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 DRAXINQ8NBI3 349 aaPredicted RBP11.36□□□□□ -0.59
COL3A1-203ENST00000450867 SGMS2Q8NHU3 365 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 RBMXL1Q96E39 390 aaKnown RBP11.36□□□□□ -0.59
COL3A1-203ENST00000450867 ABHD1Q96SE0 405 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 RBM7Q9Y580 266 aaKnown RBP11.36□□□□□ -0.59
COL3A1-203ENST00000450867 KCNAB3O43448 404 aa11.35□□□□□ -0.59
COL3A1-203ENST00000450867 IGKV1-16P04430 117 aa11.35□□□□□ -0.59
COL3A1-203ENST00000450867 RRASP10301 218 aa11.35□□□□□ -0.59
COL3A1-203ENST00000450867 AADACP22760 399 aa11.35□□□□□ -0.59
COL3A1-203ENST00000450867 CNTFRP26992 372 aa11.35□□□□□ -0.59
COL3A1-203ENST00000450867 LINC00205P59089 165 aa11.35□□□□□ -0.59
COL3A1-203ENST00000450867 TMEM177Q53S58 311 aa11.35□□□□□ -0.59
COL3A1-203ENST00000450867 ARSJQ5FYB0 599 aaPredicted RBP11.35□□□□□ -0.59
COL3A1-203ENST00000450867 RASL11BQ9BPW5 248 aa11.35□□□□□ -0.59
COL3A1-203ENST00000450867 SOSTQ9BQB4 213 aa11.35□□□□□ -0.59
COL3A1-203ENST00000450867 SLC35D1Q9NTN3 355 aa11.35□□□□□ -0.59
COL3A1-203ENST00000450867 MTFP1Q9UDX5 166 aa11.35□□□□□ -0.59
COL3A1-203ENST00000450867 RBMX2Q9Y388 322 aaKnown RBP11.35□□□□□ -0.59
COL3A1-203ENST00000450867 LINC00473A8K010 186 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 GABARAPH6UMI1 98 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 H7C2Y5 167 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 RRHO14718 337 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 CTDSPLO15194 276 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 VSIG10L2P0DP72 767 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 SSBP1Q04837 148 aaKnown RBP11.34□□□□□ -0.59
COL3A1-203ENST00000450867 C9orf152Q5JTZ5 239 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 PRR31Q5SQ13 230 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 SLC35E3Q7Z769 313 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 ZBTB34Q8NCN2 500 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 OR5H2Q8NGV7 314 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 OR52I2Q8NH67 350 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 MCFD2Q8NI22 146 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 CHPT1Q8WUD6 406 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 HSD17B10Q99714 261 aaKnown RBP11.34□□□□□ -0.59
COL3A1-203ENST00000450867 MMP27Q9H306 513 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 EHFQ9NZC4 300 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 NDUFA13Q9P0J0 144 aa11.34□□□□□ -0.59
COL3A1-203ENST00000450867 ZNF107Q9UII5 783 aaPredicted RBP11.34□□□□□ -0.59
COL3A1-203ENST00000450867 CCDC160A6NGH7 325 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 AP4M1O00189 453 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 IGF1P05019 195 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 FCER2P06734 321 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 TBPP20226 339 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 HRH1P35367 487 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 LGALS7P47929 136 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 RFX2P48378 723 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 RTL8BQ17RB0 113 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 ACTBL2Q562R1 376 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 VAX1Q5SQQ9 334 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 PYHIN1Q6K0P9 492 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 ZNF66Q6ZN08 573 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 SMIM4Q8WVI0 70 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 MOB3AQ96BX8 217 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 FLYWCH2Q96CP2 140 aaKnown RBP11.33□□□□□ -0.6
COL3A1-203ENST00000450867 DIRAS2Q96HU8 199 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 TSNAXQ99598 290 aaKnown RBP11.33□□□□□ -0.6
COL3A1-203ENST00000450867 HSPB9Q9BQS6 159 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 C6orf62Q9GZU0 229 aaPredicted RBP11.33□□□□□ -0.6
COL3A1-203ENST00000450867 KIAA1456Q9P272 454 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 KLK11Q9UBX7 282 aa11.33□□□□□ -0.6
COL3A1-203ENST00000450867 LINC01548A6NM66 108 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 PEX14O75381 377 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 FBXO24O75426 580 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 IGLV2-23P01705 113 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 HLA-DMAP28067 261 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 TNFSF8P32971 234 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 CRIP2P52943 208 aaPredicted RBP11.32□□□□□ -0.6
COL3A1-203ENST00000450867 CD83Q01151 205 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 PSG5Q15238 335 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 KCTD9Q7L273 389 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 FOXRED2Q8IWF2 684 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 STPG2Q8N412 459 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 BVESQ8NE79 360 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 SECTM1Q8WVN6 248 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 FCAMRQ8WWV6 532 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 BORCS5Q969J3 196 aa11.32□□□□□ -0.6
COL3A1-203ENST00000450867 IGHV7-81A0A0B4J1V7 117 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 ADARB2-AS1A8MUL3 147 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 J3QRK9 145 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 M0QZ24 198 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 GSTZ1O43708 216 aaPredicted RBP11.31□□□□□ -0.6
COL3A1-203ENST00000450867 PMP2P02689 132 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 CD74P04233 296 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 CRYGBP07316 175 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 CD28P10747 220 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 HERV-K104P61576 105 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 RPS16P62249 146 aaKnown RBP11.31□□□□□ -0.6
COL3A1-203ENST00000450867 RPL30P62888 115 aaKnown RBP11.31□□□□□ -0.6
COL3A1-203ENST00000450867 DGCR2P98153 550 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 CFHR3Q02985 330 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 CBX3Q13185 183 aa11.31□□□□□ -0.6
COL3A1-203ENST00000450867 TCTEX1D4Q5JR98 221 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms