RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 DNAH3Q8TD57 4116 aa17.06■□□□□ 0.32
CPSF7-208ENST00000450000 FCGR3AP08637 254 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 CRIP2P52943 208 aaPredicted RBP17.05■□□□□ 0.32
CPSF7-208ENST00000450000 TPPP2P59282 170 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 KIAA0141Q14154 515 aaPredicted RBP17.05■□□□□ 0.32
CPSF7-208ENST00000450000 AKIRIN2Q53H80 203 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 C22orf42Q6IC83 251 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 CD200R1LQ6Q8B3 271 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 ZNF383Q8NA42 475 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 LFNGQ8NES3 379 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 GRPEL2Q8TAA5 225 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 CASTOR1Q8WTX7 329 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 ARPC1AQ92747 370 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 ATG5Q9H1Y0 275 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 ZNF256Q9Y2P7 627 aaPredicted RBP17.05■□□□□ 0.32
CPSF7-208ENST00000450000 FBXO7Q9Y3I1 522 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 NUBP2Q9Y5Y2 271 aa17.05■□□□□ 0.32
CPSF7-208ENST00000450000 IGKV1-6A0A0C4DH72 117 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 SLC25A17O43808 307 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 MRPS14O60783 128 aaKnown RBP17.04■□□□□ 0.32
CPSF7-208ENST00000450000 SAP30O75446 220 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 IGKV1-16P04430 117 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 LGALS1P09382 135 aaKnown RBP17.04■□□□□ 0.32
CPSF7-208ENST00000450000 GSTT2P0CG29 244 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 GSTT2BP0CG30 244 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 HIST1H1DP16402 221 aaKnown RBP17.04■□□□□ 0.32
CPSF7-208ENST00000450000 PSMB9P28065 219 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 GABARAPL2P60520 117 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 TAGLNQ01995 201 aaKnown RBP17.04■□□□□ 0.32
CPSF7-208ENST00000450000 PLA2G7Q13093 441 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 FXYD3Q14802 87 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 RTL8BQ17RB0 113 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 MOGAT2Q3SYC2 334 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 IGSF11Q5DX21 431 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 ZNF429Q86V71 674 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 DCUN1D4Q92564 292 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 SLA2Q9H6Q3 261 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 SCOCQ9UIL1 159 aa17.04■□□□□ 0.32
CPSF7-208ENST00000450000 NHLRC4P0CG21 123 aaPredicted RBP17.03■□□□□ 0.32
CPSF7-208ENST00000450000 GALP22466 123 aa17.03■□□□□ 0.32
CPSF7-208ENST00000450000 LGALS7P47929 136 aa17.03■□□□□ 0.32
CPSF7-208ENST00000450000 MAFIPQ8WZ33 124 aa17.03■□□□□ 0.32
CPSF7-208ENST00000450000 TOLLIPQ9H0E2 274 aa17.03■□□□□ 0.32
CPSF7-208ENST00000450000 ALX4Q9H161 411 aaPredicted RBP17.03■□□□□ 0.32
CPSF7-208ENST00000450000 ZNF230Q9UIE0 474 aaPredicted RBP17.03■□□□□ 0.32
CPSF7-208ENST00000450000 GAB2Q9UQC2 676 aa17.03■□□□□ 0.32
CPSF7-208ENST00000450000 SHOXO15266 292 aa17.02■□□□□ 0.32
CPSF7-208ENST00000450000 SOX15O60248 233 aa17.02■□□□□ 0.32
CPSF7-208ENST00000450000 IGHV3-11P01762 117 aa17.02■□□□□ 0.32
CPSF7-208ENST00000450000 TRGV3P03979 118 aa17.02■□□□□ 0.32
CPSF7-208ENST00000450000 LINC00205P59089 165 aa17.02■□□□□ 0.32
CPSF7-208ENST00000450000 HARBI1Q96MB7 349 aa17.02■□□□□ 0.32
CPSF7-208ENST00000450000 CABLES2Q9BTV7 478 aa17.02■□□□□ 0.32
CPSF7-208ENST00000450000 SDHAF2Q9NX18 166 aa17.02■□□□□ 0.32
CPSF7-208ENST00000450000 KCNK7Q9Y2U2 307 aa17.02■□□□□ 0.32
CPSF7-208ENST00000450000 TRBV6-7A0A0A0MS04 114 aa17.01■□□□□ 0.31
CPSF7-208ENST00000450000 MFNGO00587 321 aa17.01■□□□□ 0.31
CPSF7-208ENST00000450000 PROP1O75360 226 aa17.01■□□□□ 0.31
CPSF7-208ENST00000450000 DIRAS3O95661 229 aa17.01■□□□□ 0.31
CPSF7-208ENST00000450000 HSPB1P04792 205 aaKnown RBP17.01■□□□□ 0.31
CPSF7-208ENST00000450000 RRASP10301 218 aa17.01■□□□□ 0.31
CPSF7-208ENST00000450000 SLURP1P55000 103 aa17.01■□□□□ 0.31
CPSF7-208ENST00000450000 FCGR1BQ92637 280 aa17.01■□□□□ 0.31
CPSF7-208ENST00000450000 A0A0B4J203 849 aa17■□□□□ 0.31
CPSF7-208ENST00000450000 C13orf42A0A1B0GVH6 325 aa17■□□□□ 0.31
CPSF7-208ENST00000450000 RAB27BO00194 218 aa17■□□□□ 0.31
CPSF7-208ENST00000450000 ARPC1BO15143 372 aaKnown RBP17■□□□□ 0.31
CPSF7-208ENST00000450000 EGR2P11161 476 aaPredicted RBP17■□□□□ 0.31
CPSF7-208ENST00000450000 PITPNAQ00169 270 aa17■□□□□ 0.31
CPSF7-208ENST00000450000 C19orf54Q5BKX5 351 aa17■□□□□ 0.31
CPSF7-208ENST00000450000 ASPHD1Q5U4P2 390 aa17■□□□□ 0.31
CPSF7-208ENST00000450000 DLX4Q92988 240 aaPredicted RBP17■□□□□ 0.31
CPSF7-208ENST00000450000 ADTRPQ96IZ2 230 aa17■□□□□ 0.31
CPSF7-208ENST00000450000 WWC2-AS2Q96NR7 200 aa17■□□□□ 0.31
CPSF7-208ENST00000450000 OR4C12Q96R67 309 aa17■□□□□ 0.31
CPSF7-208ENST00000450000 PHB2Q99623 299 aa17■□□□□ 0.31
CPSF7-208ENST00000450000 SSR3Q9UNL2 185 aa17■□□□□ 0.31
CPSF7-208ENST00000450000 IGHV4OR15-8A0A075B7B6 117 aa16.99■□□□□ 0.31
CPSF7-208ENST00000450000 A0A087WW49 117 aa16.99■□□□□ 0.31
CPSF7-208ENST00000450000 SHISA3A0PJX4 238 aa16.99■□□□□ 0.31
CPSF7-208ENST00000450000 SMIM30A4D0T7 59 aa16.99■□□□□ 0.31
CPSF7-208ENST00000450000 BVESQ8NE79 360 aa16.99■□□□□ 0.31
CPSF7-208ENST00000450000 OR5T1Q8NG75 326 aa16.99■□□□□ 0.31
CPSF7-208ENST00000450000 OR6Q1Q8NGQ2 317 aa16.99■□□□□ 0.31
CPSF7-208ENST00000450000 TMEM68Q96MH6 324 aa16.99■□□□□ 0.31
CPSF7-208ENST00000450000 ST6GALNAC5Q9BVH7 336 aa16.99■□□□□ 0.31
CPSF7-208ENST00000450000 ELOVL1Q9BW60 279 aa16.99■□□□□ 0.31
CPSF7-208ENST00000450000 LSM4Q9Y4Z0 139 aaKnown RBP16.99■□□□□ 0.31
CPSF7-208ENST00000450000 SMAD5-AS1Q9Y6J3 95 aa16.99■□□□□ 0.31
CPSF7-208ENST00000450000 A0A0G2JLM5 398 aa16.98■□□□□ 0.31
CPSF7-208ENST00000450000 NOTOA8MTQ0 251 aa16.98■□□□□ 0.31
CPSF7-208ENST00000450000 SCGNO76038 276 aa16.98■□□□□ 0.31
CPSF7-208ENST00000450000 ATP6V1G2O95670 118 aa16.98■□□□□ 0.31
CPSF7-208ENST00000450000 SRSF7Q16629 238 aaKnown RBP eCLIP16.98■□□□□ 0.31
CPSF7-208ENST00000450000 VMA21Q3ZAQ7 101 aa16.98■□□□□ 0.31
CPSF7-208ENST00000450000 CDNFQ49AH0 187 aa16.98■□□□□ 0.31
CPSF7-208ENST00000450000 UBE2UQ5VVX9 321 aa16.98■□□□□ 0.31
CPSF7-208ENST00000450000 POC5Q8NA72 575 aa16.98■□□□□ 0.31
CPSF7-208ENST00000450000 TPSG1Q9NRR2 321 aa16.98■□□□□ 0.31
CPSF7-208ENST00000450000 STUB1Q9UNE7 303 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms