RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 RNF5Q99942 180 aa13.7□□□□□ -0.22
FAM3A-216ENST00000449971 OR2D2Q9H210 308 aa13.7□□□□□ -0.22
FAM3A-216ENST00000449971 VCX3AQ9NNX9 186 aa13.7□□□□□ -0.22
FAM3A-216ENST00000449971 RHBDL2Q9NX52 303 aa13.7□□□□□ -0.22
FAM3A-216ENST00000449971 ZNF580Q9UK33 172 aa13.7□□□□□ -0.22
FAM3A-216ENST00000449971 IGKV1D-8A0A087WSZ0 117 aa13.69□□□□□ -0.22
FAM3A-216ENST00000449971 TRAV41A0A0B4J266 112 aa13.69□□□□□ -0.22
FAM3A-216ENST00000449971 DIRAS3O95661 229 aa13.69□□□□□ -0.22
FAM3A-216ENST00000449971 APOA2P02652 100 aa13.69□□□□□ -0.22
FAM3A-216ENST00000449971 CDX1P47902 265 aaPredicted RBP13.69□□□□□ -0.22
FAM3A-216ENST00000449971 GNG2P59768 71 aa13.69□□□□□ -0.22
FAM3A-216ENST00000449971 PSG5Q15238 335 aa13.69□□□□□ -0.22
FAM3A-216ENST00000449971 TMEM65Q6PI78 240 aa13.69□□□□□ -0.22
FAM3A-216ENST00000449971 Q6ZS49 121 aa13.69□□□□□ -0.22
FAM3A-216ENST00000449971 OR5H6Q8NGV6 325 aa13.69□□□□□ -0.22
FAM3A-216ENST00000449971 GAR1Q9NY12 217 aaKnown RBP13.69□□□□□ -0.22
FAM3A-216ENST00000449971 METTL1Q9UBP6 276 aaKnown RBP13.69□□□□□ -0.22
FAM3A-216ENST00000449971 BIRC6Q9NR09 4857 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 TMEM235A6NFC5 223 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 C3orf84H3BNL1 204 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 FCN1O00602 326 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 TNFAIP8O95379 198 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 IGKV1-16P04430 117 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 NHLRC4P0CG21 123 aaPredicted RBP13.68□□□□□ -0.22
FAM3A-216ENST00000449971 CX3CL1P78423 397 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 PITPNAQ00169 270 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 TIMM50Q3ZCQ8 353 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 ZNF260Q3ZCT1 412 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 ZNF660Q6AZW8 331 aaPredicted RBP13.68□□□□□ -0.22
FAM3A-216ENST00000449971 PDPNQ86YL7 162 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 RNF152Q8N8N0 203 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 ABHD5Q8WTS1 349 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 NUDCD2Q8WVJ2 157 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 FLYWCH2Q96CP2 140 aaKnown RBP13.68□□□□□ -0.22
FAM3A-216ENST00000449971 RAX2Q96IS3 184 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 TSNAXQ99598 290 aaKnown RBP13.68□□□□□ -0.22
FAM3A-216ENST00000449971 SLC35D1Q9NTN3 355 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 SDHAF2Q9NX18 166 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 GAB2Q9UQC2 676 aa13.68□□□□□ -0.22
FAM3A-216ENST00000449971 EPPK1P58107 5090 aaKnown RBP13.67□□□□□ -0.22
FAM3A-216ENST00000449971 J3QRK9 145 aa13.67□□□□□ -0.22
FAM3A-216ENST00000449971 CCL24O00175 119 aa13.67□□□□□ -0.22
FAM3A-216ENST00000449971 AIREO43918 545 aa13.67□□□□□ -0.22
FAM3A-216ENST00000449971 PSMB8P28062 276 aa13.67□□□□□ -0.22
FAM3A-216ENST00000449971 PPIFP30405 207 aaKnown RBP13.67□□□□□ -0.22
FAM3A-216ENST00000449971 RAB25P57735 213 aa13.67□□□□□ -0.22
FAM3A-216ENST00000449971 ECSCRQ19T08 205 aa13.67□□□□□ -0.22
FAM3A-216ENST00000449971 H1FOOQ8IZA3 346 aaPredicted RBP13.67□□□□□ -0.22
FAM3A-216ENST00000449971 P2RX4Q99571 388 aa13.67□□□□□ -0.22
FAM3A-216ENST00000449971 DCSTAMPQ9H295 470 aa13.67□□□□□ -0.22
FAM3A-216ENST00000449971 KLK15Q9H2R5 256 aa13.67□□□□□ -0.22
FAM3A-216ENST00000449971 ETV7Q9Y603 341 aa13.67□□□□□ -0.22
FAM3A-216ENST00000449971 A3GALT2U3KPV4 340 aa13.67□□□□□ -0.22
FAM3A-216ENST00000449971 DNAH7Q8WXX0 4024 aa13.66□□□□□ -0.22
FAM3A-216ENST00000449971 TRAV18A0A075B6X5 111 aa13.66□□□□□ -0.22
FAM3A-216ENST00000449971 CTXN2P0C2S0 81 aa13.66□□□□□ -0.22
FAM3A-216ENST00000449971 TGFBR1P36897 503 aa13.66□□□□□ -0.22
FAM3A-216ENST00000449971 SCAND1P57086 179 aa13.66□□□□□ -0.22
FAM3A-216ENST00000449971 LSM3P62310 102 aaKnown RBP13.66□□□□□ -0.22
FAM3A-216ENST00000449971 DGCR2P98153 550 aa13.66□□□□□ -0.22
FAM3A-216ENST00000449971 NDPQ00604 133 aa13.66□□□□□ -0.22
FAM3A-216ENST00000449971 DEFB136Q30KP8 78 aa13.66□□□□□ -0.22
FAM3A-216ENST00000449971 YIPF6Q96EC8 236 aa13.66□□□□□ -0.22
FAM3A-216ENST00000449971 PRR25Q96S07 402 aa13.66□□□□□ -0.22
FAM3A-216ENST00000449971 FBXO7Q9Y3I1 522 aa13.66□□□□□ -0.22
FAM3A-216ENST00000449971 SSX5O60225 188 aa13.65□□□□□ -0.22
FAM3A-216ENST00000449971 CBX3Q13185 183 aa13.65□□□□□ -0.22
FAM3A-216ENST00000449971 PPP1R27Q86WC6 154 aa13.65□□□□□ -0.22
FAM3A-216ENST00000449971 MINDY2Q8NBR6 621 aa13.65□□□□□ -0.22
FAM3A-216ENST00000449971 BVESQ8NE79 360 aa13.65□□□□□ -0.22
FAM3A-216ENST00000449971 C4orf3Q8WVX3 66 aa13.65□□□□□ -0.22
FAM3A-216ENST00000449971 SLC25A38Q96DW6 304 aa13.65□□□□□ -0.22
FAM3A-216ENST00000449971 C5orf30Q96GV9 206 aa13.65□□□□□ -0.22
FAM3A-216ENST00000449971 MCRIP2Q9BUT9 160 aaKnown RBP13.65□□□□□ -0.22
FAM3A-216ENST00000449971 DIABLOQ9NR28 239 aa13.65□□□□□ -0.22
FAM3A-216ENST00000449971 HUWE1Q7Z6Z7 4374 aaKnown RBP13.65□□□□□ -0.22
FAM3A-216ENST00000449971 A0A1W2PN81 502 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 SLC25A17O43808 307 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 SPDEFO95238 335 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 CA2P00918 260 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 IGLV1-40P01703 118 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 EGR2P11161 476 aaPredicted RBP13.64□□□□□ -0.23
FAM3A-216ENST00000449971 NFYAP23511 347 aaPredicted RBP13.64□□□□□ -0.23
FAM3A-216ENST00000449971 CHRNA7P36544 502 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 LGALS7P47929 136 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 RAB9AP51151 201 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 TAGLNQ01995 201 aaKnown RBP13.64□□□□□ -0.23
FAM3A-216ENST00000449971 TMEM267Q0VDI3 215 aaPredicted RBP13.64□□□□□ -0.23
FAM3A-216ENST00000449971 CNIH2Q6PI25 160 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 ZNF562Q6V9R5 426 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 OR5B12Q96R08 314 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 FAM103A1Q9BTL3 118 aaKnown RBP13.64□□□□□ -0.23
FAM3A-216ENST00000449971 SPATA2Q9UM82 520 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 NUBP2Q9Y5Y2 271 aa13.64□□□□□ -0.23
FAM3A-216ENST00000449971 RPS19P39019 145 aaKnown RBP13.63□□□□□ -0.23
FAM3A-216ENST00000449971 LUMP51884 338 aaPredicted RBP13.63□□□□□ -0.23
FAM3A-216ENST00000449971 KIAA0141Q14154 515 aaPredicted RBP13.63□□□□□ -0.23
FAM3A-216ENST00000449971 RTL8BQ17RB0 113 aa13.63□□□□□ -0.23
FAM3A-216ENST00000449971 UNQ5815/PRO19632Q6UWF5 114 aa13.63□□□□□ -0.23
FAM3A-216ENST00000449971 CROCCP3Q8IVE0 287 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms