RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 YTHDF1Q9BYJ9 559 aaKnown RBP13.5□□□□□ -0.25
CLTCL1-203ENST00000449918 NUBP2Q9Y5Y2 271 aa13.5□□□□□ -0.25
CLTCL1-203ENST00000449918 A3GALT2U3KPV4 340 aa13.5□□□□□ -0.25
CLTCL1-203ENST00000449918 TRBV6-7A0A0A0MS04 114 aa13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 OR8U9P0C7N5 309 aa13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 EGR2P11161 476 aaPredicted RBP13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 PSMB9P28065 219 aa13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 FGF9P31371 208 aaPredicted RBP13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 CD69Q07108 199 aa13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 ARFRP1Q13795 201 aa13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 SRSF7Q16629 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 AKIRIN2Q53H80 203 aa13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 C19orf54Q5BKX5 351 aa13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 IGSF11Q5DX21 431 aa13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 CABLES2Q9BTV7 478 aa13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 ATG5Q9H1Y0 275 aa13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 FBXO7Q9Y3I1 522 aa13.49□□□□□ -0.25
CLTCL1-203ENST00000449918 DNAH3Q8TD57 4116 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 INSL3P51460 131 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 LINC00205P59089 165 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 TAGLNQ01995 201 aaKnown RBP13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 CBX3Q13185 183 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 ZNF260Q3ZCT1 412 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 ACTBL2Q562R1 376 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 UNQ5815/PRO19632Q6UWF5 114 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 TPRA1Q86W33 373 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 B9D2Q9BPU9 175 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 GINS4Q9BRT9 223 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 OR2D2Q9H210 308 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 SLC35D1Q9NTN3 355 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 ZNF230Q9UIE0 474 aaPredicted RBP13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 SCOCQ9UIL1 159 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 STUB1Q9UNE7 303 aa13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 RBM7Q9Y580 266 aaKnown RBP13.48□□□□□ -0.25
CLTCL1-203ENST00000449918 A0A0B4J203 849 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 NOTOA8MTQ0 251 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 SOX15O60248 233 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 CA2P00918 260 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 ECI1P42126 302 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 LGALS7P47929 136 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 GNB1P62873 340 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 VAX1Q5SQQ9 334 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 Q6ZS49 121 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 NR2C2APQ86WQ0 139 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 MAFIPQ8WZ33 124 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 TXNL4BQ9NX01 149 aaKnown RBP13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 SDHAF2Q9NX18 166 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 SSR3Q9UNL2 185 aa13.47□□□□□ -0.25
CLTCL1-203ENST00000449918 SLC25A17O43808 307 aa13.46□□□□□ -0.25
CLTCL1-203ENST00000449918 CNIH1O95406 144 aa13.46□□□□□ -0.25
CLTCL1-203ENST00000449918 FXYD3Q14802 87 aa13.46□□□□□ -0.25
CLTCL1-203ENST00000449918 RTL8BQ17RB0 113 aa13.46□□□□□ -0.25
CLTCL1-203ENST00000449918 LFNGQ8NES3 379 aa13.46□□□□□ -0.25
CLTCL1-203ENST00000449918 ARPC1AQ92747 370 aa13.46□□□□□ -0.25
CLTCL1-203ENST00000449918 FAM103A1Q9BTL3 118 aaKnown RBP13.46□□□□□ -0.25
CLTCL1-203ENST00000449918 SMIM30A4D0T7 59 aa13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 LINC01619G3V211 115 aa13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 SCGNO76038 276 aa13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 LGALS1P09382 135 aaKnown RBP13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 RRASP10301 218 aa13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 DTYMKP23919 212 aa13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 CDNFQ49AH0 187 aa13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 ASPHD1Q5U4P2 390 aa13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 CASTOR1Q8WTX7 329 aa13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 DCUN1D4Q92564 292 aa13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 ADTRPQ96IZ2 230 aa13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 SLA2Q9H6Q3 261 aa13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLTCL1-203ENST00000449918 OVOL1O14753 267 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 CTXN2P0C2S0 81 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 TPPP2P59282 170 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 PITPNAQ00169 270 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 HACD4Q5VWC8 232 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 ZNF773Q6PK81 442 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 ZNF429Q86V71 674 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 H1FOOQ8IZA3 346 aaPredicted RBP13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 GRPEL2Q8TAA5 225 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 HARBI1Q96MB7 349 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 MS4A10Q96PG2 267 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 ST6GALNAC5Q9BVH7 336 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 ALX4Q9H161 411 aaPredicted RBP13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 DCSTAMPQ9H295 470 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 DAPK2Q9UIK4 370 aa13.44□□□□□ -0.26
CLTCL1-203ENST00000449918 ARPC1BO15143 372 aaKnown RBP13.43□□□□□ -0.26
CLTCL1-203ENST00000449918 SHOXO15266 292 aa13.43□□□□□ -0.26
CLTCL1-203ENST00000449918 HSPB1P04792 205 aaKnown RBP13.43□□□□□ -0.26
CLTCL1-203ENST00000449918 BVESQ8NE79 360 aa13.43□□□□□ -0.26
CLTCL1-203ENST00000449918 TMEM68Q96MH6 324 aa13.43□□□□□ -0.26
CLTCL1-203ENST00000449918 PRR25Q96S07 402 aa13.43□□□□□ -0.26
CLTCL1-203ENST00000449918 TPSG1Q9NRR2 321 aa13.43□□□□□ -0.26
CLTCL1-203ENST00000449918 ZNF355PQ9NSJ1 428 aa13.43□□□□□ -0.26
CLTCL1-203ENST00000449918 ZNF256Q9Y2P7 627 aaPredicted RBP13.43□□□□□ -0.26
CLTCL1-203ENST00000449918 RRP15Q9Y3B9 282 aaKnown RBP13.43□□□□□ -0.26
CLTCL1-203ENST00000449918 H3BUA1 57 aa13.42□□□□□ -0.26
CLTCL1-203ENST00000449918 IGLV2-23P01705 113 aa13.42□□□□□ -0.26
CLTCL1-203ENST00000449918 TRGV3P03979 118 aa13.42□□□□□ -0.26
CLTCL1-203ENST00000449918 CRYGBP07316 175 aa13.42□□□□□ -0.26
CLTCL1-203ENST00000449918 NHLRC4P0CG21 123 aaPredicted RBP13.42□□□□□ -0.26
CLTCL1-203ENST00000449918 TMEM177Q53S58 311 aa13.42□□□□□ -0.26
CLTCL1-203ENST00000449918 SFXN4Q6P4A7 337 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms