RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 NOTOA8MTQ0 251 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 SEC14L6B5MCN3 397 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 FCN1O00602 326 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 RAMP3O60896 148 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 SPDEFO95238 335 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 DIRAS3O95661 229 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 OR8U8P0C7N1 319 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 CD40LGP29965 261 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 FGF9P31371 208 aaPredicted RBP11.89□□□□□ -0.51
CHD3-205ENST00000449744 LUMP51884 338 aaPredicted RBP11.89□□□□□ -0.51
CHD3-205ENST00000449744 CRIP2P52943 208 aaPredicted RBP11.89□□□□□ -0.51
CHD3-205ENST00000449744 LINC00205P59089 165 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 CBX3Q13185 183 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 DCTN2Q13561 401 aaKnown RBP11.89□□□□□ -0.51
CHD3-205ENST00000449744 UNQ5815/PRO19632Q6UWF5 114 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 PPP1R27Q86WC6 154 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 MAFIPQ8WZ33 124 aa11.89□□□□□ -0.51
CHD3-205ENST00000449744 I3L521 148 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 CA2P00918 260 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 IGKV1-16P04430 117 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 RUNX1Q01196 453 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 ZNF616Q08AN1 781 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 FHL3Q13643 280 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 KIAA0141Q14154 515 aaPredicted RBP11.88□□□□□ -0.51
CHD3-205ENST00000449744 SRSF7Q16629 238 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHD3-205ENST00000449744 ACTBL2Q562R1 376 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 PYHIN1Q6K0P9 492 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 ZNF562Q6V9R5 426 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 TPRA1Q86W33 373 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 NR2C2APQ86WQ0 139 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 FAM103A1Q9BTL3 118 aaKnown RBP11.88□□□□□ -0.51
CHD3-205ENST00000449744 SDHAF2Q9NX18 166 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 DAPK2Q9UIK4 370 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 GAB2Q9UQC2 676 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 NUBP2Q9Y5Y2 271 aa11.88□□□□□ -0.51
CHD3-205ENST00000449744 SLC25A17O43808 307 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 SOX15O60248 233 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 SCGNO76038 276 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 LGALS7P47929 136 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 GNB1P62873 340 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 TAGLNQ01995 201 aaKnown RBP11.87□□□□□ -0.51
CHD3-205ENST00000449744 ZNF260Q3ZCT1 412 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 CDNFQ49AH0 187 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 AKIRIN2Q53H80 203 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 C19orf54Q5BKX5 351 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 ZNF773Q6PK81 442 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 LFNGQ8NES3 379 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 ARPC1AQ92747 370 aa11.87□□□□□ -0.51
CHD3-205ENST00000449744 RRP15Q9Y3B9 282 aaKnown RBP11.87□□□□□ -0.51
CHD3-205ENST00000449744 CNIH1O95406 144 aa11.86□□□□□ -0.51
CHD3-205ENST00000449744 EGR2P11161 476 aaPredicted RBP11.86□□□□□ -0.51
CHD3-205ENST00000449744 DTYMKP23919 212 aa11.86□□□□□ -0.51
CHD3-205ENST00000449744 ECI1P42126 302 aa11.86□□□□□ -0.51
CHD3-205ENST00000449744 CD69Q07108 199 aa11.86□□□□□ -0.51
CHD3-205ENST00000449744 FXYD3Q14802 87 aa11.86□□□□□ -0.51
CHD3-205ENST00000449744 RTL8BQ17RB0 113 aa11.86□□□□□ -0.51
CHD3-205ENST00000449744 Q6ZS49 121 aa11.86□□□□□ -0.51
CHD3-205ENST00000449744 GRPEL2Q8TAA5 225 aa11.86□□□□□ -0.51
CHD3-205ENST00000449744 CASTOR1Q8WTX7 329 aa11.86□□□□□ -0.51
CHD3-205ENST00000449744 HARBI1Q96MB7 349 aa11.86□□□□□ -0.51
CHD3-205ENST00000449744 OR51E2Q9H255 320 aa11.86□□□□□ -0.51
CHD3-205ENST00000449744 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHD3-205ENST00000449744 SHOXO15266 292 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 CTXN2P0C2S0 81 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 RRASP10301 218 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 SNRPBP14678 240 aaKnown RBP11.85□□□□□ -0.51
CHD3-205ENST00000449744 TPPP2P59282 170 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 PITPNAQ00169 270 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 HACD4Q5VWC8 232 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 SFXN4Q6P4A7 337 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 H1FOOQ8IZA3 346 aaPredicted RBP11.85□□□□□ -0.51
CHD3-205ENST00000449744 BVESQ8NE79 360 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 ADTRPQ96IZ2 230 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 MS4A10Q96PG2 267 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 ST6GALNAC5Q9BVH7 336 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 ALX4Q9H161 411 aaPredicted RBP11.85□□□□□ -0.51
CHD3-205ENST00000449744 SLA2Q9H6Q3 261 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 TPSG1Q9NRR2 321 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 ZNF355PQ9NSJ1 428 aa11.85□□□□□ -0.51
CHD3-205ENST00000449744 ELF5Q9UKW6 265 aaPredicted RBP11.85□□□□□ -0.51
CHD3-205ENST00000449744 LINC01619G3V211 115 aa11.84□□□□□ -0.51
CHD3-205ENST00000449744 J3QRK9 145 aa11.84□□□□□ -0.51
CHD3-205ENST00000449744 OVOL1O14753 267 aa11.84□□□□□ -0.51
CHD3-205ENST00000449744 LGALS1P09382 135 aaKnown RBP11.84□□□□□ -0.51
CHD3-205ENST00000449744 SDC2P34741 201 aa11.84□□□□□ -0.51
CHD3-205ENST00000449744 INSL3P51460 131 aa11.84□□□□□ -0.51
CHD3-205ENST00000449744 GNG2P59768 71 aa11.84□□□□□ -0.51
CHD3-205ENST00000449744 MXD1Q05195 221 aa11.84□□□□□ -0.51
CHD3-205ENST00000449744 ASPHD1Q5U4P2 390 aa11.84□□□□□ -0.51
CHD3-205ENST00000449744 LGALS14Q8TCE9 139 aa11.84□□□□□ -0.51
CHD3-205ENST00000449744 DCUN1D4Q92564 292 aa11.84□□□□□ -0.51
CHD3-205ENST00000449744 DCSTAMPQ9H295 470 aa11.84□□□□□ -0.51
CHD3-205ENST00000449744 IGKV1D-8A0A087WSZ0 117 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 LOC100506127A0A0U1RQW1 187 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 TMEM235A6NFC5 223 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 IGLV2-23P01705 113 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 IGHV3-11P01762 117 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 TRGV3P03979 118 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 NEDD8Q15843 81 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 VMA21Q3ZAQ7 101 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms