RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 REC114Q7Z4M0 266 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 ZNF329Q86UD4 541 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 STPG2Q8N412 459 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 OR5AN1Q8NGI8 311 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 HSPB9Q9BQS6 159 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 PLSCR3Q9NRY6 295 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 SLC35D1Q9NTN3 355 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 COL7A1Q02388 2944 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 TCRBV4S1A1TA0A5B7 111 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 FAM25AB3EWG3 89 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 FAM25CB3EWG5 89 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 FAM25GB3EWG6 89 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 RBBP9O75884 186 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 VDAC1P21796 283 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 LUMP51884 338 aaPredicted RBP11.49□□□□□ -0.57
USP39-206ENST00000448971 HOGA1Q86XE5 327 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 PDPNQ86YL7 162 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 ZNF383Q8NA42 475 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 RAB2BQ8WUD1 216 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 RITA1Q96K30 269 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 NECAP2Q9NVZ3 263 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 OR2W1Q9Y3N9 320 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 RYR3Q15413 4870 aa11.49□□□□□ -0.57
USP39-206ENST00000448971 SMIM31A0A1B0GVY4 71 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 HPGDSO60760 199 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 PROP1O75360 226 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 NDUFA3O95167 84 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 HLA-DRB1P01911 266 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 APOA1P02647 267 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 RPL5P46777 297 aaKnown RBP11.48□□□□□ -0.57
USP39-206ENST00000448971 THBS3P49746 956 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 LINC00205P59089 165 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 C5orf64Q2M2E5 130 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 ZNF645Q8N7E2 425 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 R3HDM4Q96D70 268 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 C5orf30Q96GV9 206 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 CMTM3Q96MX0 182 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 GON7Q9BXV9 100 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 FBXL15Q9H469 300 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 PARP11Q9NR21 331 aa11.48□□□□□ -0.57
USP39-206ENST00000448971 MRPS7Q9Y2R9 242 aaKnown RBP11.48□□□□□ -0.57
USP39-206ENST00000448971 TENM3Q9P273 2699 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 LINC01548A6NM66 108 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 RRHO14718 337 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 SPDEFO95238 335 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 IGKV1-16P04430 117 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 PF4V1P10720 104 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 ZNF182P17025 639 aaPredicted RBP11.47□□□□□ -0.57
USP39-206ENST00000448971 RPS16P62249 146 aaKnown RBP11.47□□□□□ -0.57
USP39-206ENST00000448971 CD83Q01151 205 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 SPCS2Q15005 226 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 RTL8BQ17RB0 113 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 SNX29P2Q8IUI4 249 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 NPBQ8NG41 125 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 OR4F17Q8NGA8 305 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 ABHD5Q8WTS1 349 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 SNAPC3Q92966 411 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 FLYWCH2Q96CP2 140 aaKnown RBP11.47□□□□□ -0.57
USP39-206ENST00000448971 HARBI1Q96MB7 349 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 OR4F4Q96R69 305 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 TSNAXQ99598 290 aaKnown RBP11.47□□□□□ -0.57
USP39-206ENST00000448971 METTL1Q9UBP6 276 aaKnown RBP11.47□□□□□ -0.57
USP39-206ENST00000448971 SCOCQ9UIL1 159 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 GAB2Q9UQC2 676 aa11.47□□□□□ -0.57
USP39-206ENST00000448971 TSSC4Q9Y5U2 329 aaPredicted RBP11.47□□□□□ -0.57
USP39-206ENST00000448971 ATP6V0E1O15342 81 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 OR5H8P0DN80 308 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 ELK1P19419 428 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 FCGR2CP31995 323 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 PRSS3P35030 304 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 TCTEX1D4Q5JR98 221 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 LIN54Q6MZP7 749 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 KCTD9Q7L273 389 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 COMMD1Q8N668 190 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 BVESQ8NE79 360 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 MRAPQ8TCY5 172 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 ADTRPQ96IZ2 230 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 RNF5Q99942 180 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 EHFQ9NZC4 300 aa11.46□□□□□ -0.57
USP39-206ENST00000448971 DNAH9Q9NYC9 4486 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 IGHV7-81A0A0B4J1V7 117 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 IGKV1D-13A0A0B4J2D9 117 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 ADARB2-AS1A8MUL3 147 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 RGS5O15539 181 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 SLC25A17O43808 307 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 TUSC2O75896 110 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 SLC22A5O76082 557 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 HLA-DQB1P01920 261 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 PF4P02776 101 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 IGKV1-13P0DP09 117 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 RRASP10301 218 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 AADACP22760 399 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 DUTP33316 252 aaKnown RBP11.45□□□□□ -0.58
USP39-206ENST00000448971 TMBIM6P55061 237 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 FXYD4P59646 89 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 TAGLNQ01995 201 aaKnown RBP11.45□□□□□ -0.58
USP39-206ENST00000448971 CDK10Q15131 360 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 ECSCRQ19T08 205 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 OR5AP2Q8NGF4 316 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 SECTM1Q8WVN6 248 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms