RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 TRBV6-7A0A0A0MS04 114 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 I3L521 148 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 SOX15O60248 233 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 SNRPBP14678 240 aaKnown RBP13.76□□□□□ -0.21
DDX56-207ENST00000448192 FGF9P31371 208 aaPredicted RBP13.76□□□□□ -0.21
DDX56-207ENST00000448192 GNB1P62873 340 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 TMEM267Q0VDI3 215 aaPredicted RBP13.76□□□□□ -0.21
DDX56-207ENST00000448192 C19orf54Q5BKX5 351 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 PDPNQ86YL7 162 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.76□□□□□ -0.21
DDX56-207ENST00000448192 FLYWCH2Q96CP2 140 aaKnown RBP13.76□□□□□ -0.21
DDX56-207ENST00000448192 GINS4Q9BRT9 223 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 CABLES2Q9BTV7 478 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 YTHDF1Q9BYJ9 559 aaKnown RBP13.76□□□□□ -0.21
DDX56-207ENST00000448192 TOLLIPQ9H0E2 274 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 SLC35D1Q9NTN3 355 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 STUB1Q9UNE7 303 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 SSR3Q9UNL2 185 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 RBM7Q9Y580 266 aaKnown RBP13.76□□□□□ -0.21
DDX56-207ENST00000448192 NUBP2Q9Y5Y2 271 aa13.76□□□□□ -0.21
DDX56-207ENST00000448192 NOTOA8MTQ0 251 aa13.75□□□□□ -0.21
DDX56-207ENST00000448192 SLC25A17O43808 307 aa13.75□□□□□ -0.21
DDX56-207ENST00000448192 CA2P00918 260 aa13.75□□□□□ -0.21
DDX56-207ENST00000448192 EGR2P11161 476 aaPredicted RBP13.75□□□□□ -0.21
DDX56-207ENST00000448192 CRIP2P52943 208 aaPredicted RBP13.75□□□□□ -0.21
DDX56-207ENST00000448192 RUNX1Q01196 453 aa13.75□□□□□ -0.21
DDX56-207ENST00000448192 ZNF616Q08AN1 781 aa13.75□□□□□ -0.21
DDX56-207ENST00000448192 ACTBL2Q562R1 376 aa13.75□□□□□ -0.21
DDX56-207ENST00000448192 UNQ5815/PRO19632Q6UWF5 114 aa13.75□□□□□ -0.21
DDX56-207ENST00000448192 ZNF562Q6V9R5 426 aa13.75□□□□□ -0.21
DDX56-207ENST00000448192 TCTEX1D1Q8N7M0 179 aa13.75□□□□□ -0.21
DDX56-207ENST00000448192 SDHAF2Q9NX18 166 aa13.75□□□□□ -0.21
DDX56-207ENST00000448192 ELF5Q9UKW6 265 aaPredicted RBP13.75□□□□□ -0.21
DDX56-207ENST00000448192 RAMP3O60896 148 aa13.74□□□□□ -0.21
DDX56-207ENST00000448192 SPDEFO95238 335 aa13.74□□□□□ -0.21
DDX56-207ENST00000448192 OR8U8P0C7N1 319 aa13.74□□□□□ -0.21
DDX56-207ENST00000448192 ZNF260Q3ZCT1 412 aa13.74□□□□□ -0.21
DDX56-207ENST00000448192 CDNFQ49AH0 187 aa13.74□□□□□ -0.21
DDX56-207ENST00000448192 LFNGQ8NES3 379 aa13.74□□□□□ -0.21
DDX56-207ENST00000448192 ALX4Q9H161 411 aaPredicted RBP13.74□□□□□ -0.21
DDX56-207ENST00000448192 TPSG1Q9NRR2 321 aa13.74□□□□□ -0.21
DDX56-207ENST00000448192 DAPK2Q9UIK4 370 aa13.74□□□□□ -0.21
DDX56-207ENST00000448192 IGKV1D-8A0A087WSZ0 117 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 DIRAS3O95661 229 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 ECI1P42126 302 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 CD69Q07108 199 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 ARL6IP1Q15041 203 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 AKIRIN2Q53H80 203 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 ASPHD1Q5U4P2 390 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 ZNF773Q6PK81 442 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 TPRA1Q86W33 373 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 GRPEL2Q8TAA5 225 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 ARPC1AQ92747 370 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 MS4A10Q96PG2 267 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 OR51E2Q9H255 320 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 SCOCQ9UIL1 159 aa13.73□□□□□ -0.21
DDX56-207ENST00000448192 RRP15Q9Y3B9 282 aaKnown RBP13.73□□□□□ -0.21
DDX56-207ENST00000448192 CNIH1O95406 144 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 CD40LGP29965 261 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 MXD1Q05195 221 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 CBX3Q13185 183 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 FXYD3Q14802 87 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 SRSF7Q16629 238 aaKnown RBP eCLIP13.72□□□□□ -0.21
DDX56-207ENST00000448192 PYHIN1Q6K0P9 492 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 Q6ZS49 121 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 BVESQ8NE79 360 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 C5orf30Q96GV9 206 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 PRR25Q96S07 402 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 CENPOQ9BU64 300 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 ST6GALNAC5Q9BVH7 336 aa13.72□□□□□ -0.21
DDX56-207ENST00000448192 J3QRK9 145 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 ARPC1BO15143 372 aaKnown RBP13.71□□□□□ -0.21
DDX56-207ENST00000448192 SHOXO15266 292 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 IGHV3-11P01762 117 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 DTYMKP23919 212 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 SDC2P34741 201 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 LGALS7P47929 136 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 TPPP2P59282 170 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 DCTN2Q13561 401 aaKnown RBP13.71□□□□□ -0.21
DDX56-207ENST00000448192 RTL8BQ17RB0 113 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 HACD4Q5VWC8 232 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 SFXN4Q6P4A7 337 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 H1FOOQ8IZA3 346 aaPredicted RBP13.71□□□□□ -0.21
DDX56-207ENST00000448192 LGALS14Q8TCE9 139 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 DCUN1D4Q92564 292 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 HARBI1Q96MB7 349 aa13.71□□□□□ -0.21
DDX56-207ENST00000448192 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDX56-207ENST00000448192 LOC100506127A0A0U1RQW1 187 aa13.7□□□□□ -0.22
DDX56-207ENST00000448192 TMEM235A6NFC5 223 aa13.7□□□□□ -0.22
DDX56-207ENST00000448192 LINC01619G3V211 115 aa13.7□□□□□ -0.22
DDX56-207ENST00000448192 OVOL1O14753 267 aa13.7□□□□□ -0.22
DDX56-207ENST00000448192 IGLV2-23P01705 113 aa13.7□□□□□ -0.22
DDX56-207ENST00000448192 LGALS1P09382 135 aaKnown RBP13.7□□□□□ -0.22
DDX56-207ENST00000448192 SLURP1P55000 103 aa13.7□□□□□ -0.22
DDX56-207ENST00000448192 TAGLNQ01995 201 aaKnown RBP13.7□□□□□ -0.22
DDX56-207ENST00000448192 PJVKQ0ZLH3 352 aa13.7□□□□□ -0.22
DDX56-207ENST00000448192 NEDD8Q15843 81 aa13.7□□□□□ -0.22
DDX56-207ENST00000448192 C11orf87Q6NUJ2 197 aa13.7□□□□□ -0.22
DDX56-207ENST00000448192 NUDCD2Q8WVJ2 157 aa13.7□□□□□ -0.22
DDX56-207ENST00000448192 B9D2Q9BPU9 175 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms