RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 KRTAP10-6P60371 365 aaPredicted RBP4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 MRPS24Q96EL2 167 aaKnown RBP4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 YPEL2Q96QA6 119 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 NMNAT3Q96T66 252 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 TMEM231Q9H6L2 316 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 NINJ2Q9NZG7 142 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 SNX12Q9UMY4 172 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 UNC119BA6NIH7 251 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 HBE1P02100 147 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 CHRNGP07510 517 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 HTD2P86397 168 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 PCLAFQ15004 111 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 ZNF730Q6ZMV8 503 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 PP6455Q8WZ26 134 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 ARL11Q969Q4 196 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 SPSB1Q96BD6 273 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 BAIAP2Q9UQB8 552 aa4.17□□□□□ -1.74
BRAFP1-201ENST00000445336 CASQ2O14958 399 aaPredicted RBP4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 CA11O75493 328 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 ADAP1O75689 374 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 SERPINA3P01011 423 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 KRTAP1-4P0C5Y4 121 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 BCL3P20749 454 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 RBP2P50120 134 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 SSBP2P81877 361 aaPredicted RBP4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 ALKBH1Q13686 389 aaKnown RBP4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 MICAQ29983 383 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 RRM2BQ7LG56 351 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 IQCF1Q8N6M8 205 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 OR14K1Q8NGZ2 314 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 DGCR14Q96DF8 476 aaKnown RBP4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 INTS14Q96SY0 518 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 SH3GL1Q99961 368 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 HINT2Q9BX68 163 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 KAT8Q9H7Z6 458 aaKnown RBP4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 TVP23BQ9NYZ1 205 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 GOLT1BQ9Y3E0 138 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 TRAV6A0A075B6T7 132 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 CDC42EP2O14613 210 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 SOX14O95416 240 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 HIST1H1CP16403 213 aaKnown RBP4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 SSTR5P35346 364 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 ATXN7L3Q14CW9 347 aaPredicted RBP4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 NXNL2Q5VZ03 156 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 DMRTA1Q5VZB9 504 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 SPATA31B1PQ5VZV4 182 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 PLEKHG7Q6ZR37 379 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 OR4B1Q8NGF8 309 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 UBLCP1Q8WVY7 318 aaPredicted RBP4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 TRIM63Q969Q1 353 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 TAMM41Q96BW9 452 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 PHB2Q99623 299 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 NMNAT2Q9BZQ4 307 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 TRIM31Q9BZY9 425 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 SLC35D1Q9NTN3 355 aa4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 RBFOX1Q9NWB1 397 aaKnown RBP4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 UTP11Q9Y3A2 253 aaKnown RBP4.16□□□□□ -1.74
BRAFP1-201ENST00000445336 IGHV7-4-1A0A0J9YVY3 117 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 C9JCJ5 164 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 MT-ND2P03891 347 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 DEFB131AP59861 70 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 ESRGQ1W209 222 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 NHLRC3Q5JS37 347 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 UTS2BQ765I0 119 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 VN1R17PQ8TDU5 208 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 RFT1Q96AA3 541 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 FNDC11Q9BVV2 318 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 GPR84Q9NQS5 396 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 GNG12Q9UBI6 72 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 GSTK1Q9Y2Q3 226 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 SNX13Q9Y5W8 968 aa4.15□□□□□ -1.74
BRAFP1-201ENST00000445336 ST8SIA5O15466 376 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 CYB5BO43169 146 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 RPSAP08865 295 aaKnown RBP4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 SRMP19623 302 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 SF3A3Q12874 501 aaKnown RBP eCLIP4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 SPDL1Q96EA4 605 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 PSORS1C2Q9UIG4 136 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 F5H768 121 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 RAB29O14966 203 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 SULT1C4O75897 302 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 LYNP07948 512 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 RRASP10301 218 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 PDZK1IP1Q13113 114 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 RIPK1Q13546 671 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 AARDQ4LEZ3 155 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 CAVIN1Q6NZI2 390 aaKnown RBP4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 UNQ9165/PRO28630Q6UXU0 137 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 BSCL2Q96G97 398 aaPredicted RBP4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 TM2D2Q9BX73 214 aa4.15□□□□□ -1.75
BRAFP1-201ENST00000445336 LPAP08519 4548 aa4.14□□□□□ -1.75
BRAFP1-201ENST00000445336 CHEK1O14757 476 aa4.14□□□□□ -1.75
BRAFP1-201ENST00000445336 SLC31A2O15432 143 aa4.14□□□□□ -1.75
BRAFP1-201ENST00000445336 GPX5O75715 221 aa4.14□□□□□ -1.75
BRAFP1-201ENST00000445336 HLA-AP01891 365 aaKnown RBP4.14□□□□□ -1.75
BRAFP1-201ENST00000445336 APOA2P02652 100 aa4.14□□□□□ -1.75
BRAFP1-201ENST00000445336 POLR2JP52435 117 aaKnown RBP4.14□□□□□ -1.75
BRAFP1-201ENST00000445336 MORN2Q502X0 79 aa4.14□□□□□ -1.75
BRAFP1-201ENST00000445336 IGSF11Q5DX21 431 aa4.14□□□□□ -1.75
BRAFP1-201ENST00000445336 SPINK6Q6UWN8 80 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms