RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CABLES2Q9BTV7 478 aa8.46□□□□□ -1.06
SF3A1-203ENST00000444440 TOLLIPQ9H0E2 274 aa8.46□□□□□ -1.06
SF3A1-203ENST00000444440 RHBDL2Q9NX52 303 aa8.46□□□□□ -1.06
SF3A1-203ENST00000444440 RDH8Q9NYR8 311 aa8.46□□□□□ -1.06
SF3A1-203ENST00000444440 ZNF221Q9UK13 617 aa8.46□□□□□ -1.06
SF3A1-203ENST00000444440 OR5H14A6NHG9 310 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 BET1O15155 118 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 DUS4LO95620 317 aaKnown RBP8.45□□□□□ -1.06
SF3A1-203ENST00000444440 DTYMKP23919 212 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 SLC6A1P30531 599 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 MC5RP33032 325 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 RPS19P39019 145 aaKnown RBP8.45□□□□□ -1.06
SF3A1-203ENST00000444440 CRIP2P52943 208 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-203ENST00000444440 RAB25P57735 213 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 GNG2P59768 71 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 LSM3P62310 102 aaKnown RBP8.45□□□□□ -1.06
SF3A1-203ENST00000444440 GNB1P62873 340 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 CX3CL1P78423 397 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 SSBP2P81877 361 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-203ENST00000444440 ECSCRQ19T08 205 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 LIN54Q6MZP7 749 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 Q6ZS49 121 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 ZNF491Q8N8L2 437 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 MINDY2Q8NBR6 621 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 C4orf3Q8WVX3 66 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 S100A16Q96FQ6 103 aaKnown RBP8.45□□□□□ -1.06
SF3A1-203ENST00000444440 OR5B12Q96R08 314 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 CLCC1Q96S66 551 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 GINS4Q9BRT9 223 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 FAM103A1Q9BTL3 118 aaKnown RBP8.45□□□□□ -1.06
SF3A1-203ENST00000444440 ST6GALNAC5Q9BVH7 336 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 GON7Q9BXV9 100 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 ALX4Q9H161 411 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-203ENST00000444440 DCSTAMPQ9H295 470 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 SPATA2Q9UM82 520 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 WASHC3Q9Y3C0 194 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 SORL1Q92673 2214 aa8.45□□□□□ -1.06
SF3A1-203ENST00000444440 TRBV6-7A0A0A0MS04 114 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 TRAV41A0A0B4J266 112 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 H7C2Y5 167 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 ARPC1BO15143 372 aaKnown RBP8.44□□□□□ -1.06
SF3A1-203ENST00000444440 IGLV2-23P01705 113 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 CTXN2P0C2S0 81 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 PSG5Q15238 335 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 MRGPRG-AS1Q2M3A8 158 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-203ENST00000444440 OR13F1Q8NGS4 319 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 OR5H6Q8NGV6 325 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 OR8U1Q8NH10 309 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 FUNDC2Q9BWH2 189 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 MRPS26Q9BYN8 205 aaKnown RBP8.44□□□□□ -1.06
SF3A1-203ENST00000444440 OR2D2Q9H210 308 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 SDHAF2Q9NX18 166 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 KIAA1456Q9P272 454 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 METTL1Q9UBP6 276 aaKnown RBP8.44□□□□□ -1.06
SF3A1-203ENST00000444440 RBM7Q9Y580 266 aaKnown RBP8.44□□□□□ -1.06
SF3A1-203ENST00000444440 NUBP2Q9Y5Y2 271 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 A3GALT2U3KPV4 340 aa8.44□□□□□ -1.06
SF3A1-203ENST00000444440 TRAV18A0A075B6X5 111 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 A0A1W2PN81 502 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 M0R1X1 148 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 CA2P00918 260 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 TFAP2AP05549 437 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 OR8U9P0C7N5 309 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 OR5H8P0DN80 308 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 CHRNA7P36544 502 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 RAB9AP51151 201 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 ZNF260Q3ZCT1 412 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 C11orf87Q6NUJ2 197 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 OR11H1Q8NG94 326 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 KCTD12Q96CX2 325 aaKnown RBP8.43□□□□□ -1.06
SF3A1-203ENST00000444440 RNF5Q99942 180 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 SCOCQ9UIL1 159 aa8.43□□□□□ -1.06
SF3A1-203ENST00000444440 TMEM235A6NFC5 223 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 SRRM4A7MD48 611 aaKnown RBP8.42□□□□□ -1.06
SF3A1-203ENST00000444440 SLC25A17O43808 307 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 SSX5O60225 188 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 RBBP9O75884 186 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 TGFBR1P36897 503 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 RUNX1Q01196 453 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 TAGLNQ01995 201 aaKnown RBP8.42□□□□□ -1.06
SF3A1-203ENST00000444440 PJVKQ0ZLH3 352 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 PLGLAQ15195 96 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 UBE2NLQ5JXB2 153 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 ZNF660Q6AZW8 331 aaPredicted RBP8.42□□□□□ -1.06
SF3A1-203ENST00000444440 CNIH2Q6PI25 160 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 ANKRD13BQ86YJ7 626 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 PDPNQ86YL7 162 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 H1FOOQ8IZA3 346 aaPredicted RBP8.42□□□□□ -1.06
SF3A1-203ENST00000444440 NUDCD2Q8WVJ2 157 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 ACOT12Q8WYK0 555 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 SLC25A46Q96AG3 418 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 UBE2E2Q96LR5 201 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 SLC35D1Q9NTN3 355 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 RYR3Q15413 4870 aa8.42□□□□□ -1.06
SF3A1-203ENST00000444440 DNAH7Q8WXX0 4024 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 SMIM31A0A1B0GVY4 71 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 LINC00473A8K010 186 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 XRCC3O43542 346 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 SLC22A5O76082 557 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms