RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 MRPS7Q9Y2R9 242 aaKnown RBP8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 WNK1Q9H4A3 2382 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 RGS5O15539 181 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 NDUFA3O95167 84 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 EIF4EP06730 217 aaKnown RBP8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CD28P10747 220 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 NFYAP23511 347 aaPredicted RBP8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 HERV-K104P61576 105 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 C5orf64Q2M2E5 130 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 KCTD9Q7L273 389 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 STPG2Q8N412 459 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 DRAXINQ8NBI3 349 aaPredicted RBP8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 NPBQ8NG41 125 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 OR5AP2Q8NGF4 316 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 WIPF2Q8TF74 440 aaPredicted RBP8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 FLYWCH2Q96CP2 140 aaKnown RBP8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CITED2Q99967 270 aaPredicted RBP8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 PLSCR3Q9NRY6 295 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ZNF580Q9UK33 172 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 PRELID3BQ9Y3B1 194 aa8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TSSC4Q9Y5U2 329 aaPredicted RBP8.19□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TCRBV4S1A1TA0A5B7 111 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 MEIS3P1A6NDR6 274 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CCDC160A6NGH7 325 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 RRHO14718 337 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SHOXO15266 292 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CREBL2O60519 120 aaPredicted RBP8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 HPGDSO60760 199 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TSPAN15O95858 294 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 PF4V1P10720 104 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ELK1P19419 428 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SLC6A1P30531 599 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 F2RL1P55085 397 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 RPS16P62249 146 aaKnown RBP8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CDK10Q15131 360 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 NSUN5P1Q3KNT7 163 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 LIN54Q6MZP7 749 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TEX38Q6PEX7 206 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 GVQW1Q8N7I0 195 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ZNF383Q8NA42 475 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 OR5H2Q8NGV7 314 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ABHD5Q8WTS1 349 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 HARBI1Q96MB7 349 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 HSD17B10Q99714 261 aaKnown RBP8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 PARP11Q9NR21 331 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 EHFQ9NZC4 300 aa8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CCDC59Q9P031 241 aaKnown RBP8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 METTL1Q9UBP6 276 aaKnown RBP8.18□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SULT1C2O00338 296 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TPPPO94811 219 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 PPYP01298 95 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 HLA-DQB1P01920 261 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 PF4P02776 101 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 IGF1P05019 195 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 FCGR2CP31995 323 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 DUTP33316 252 aaKnown RBP8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 RCVRNP35243 200 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 LGALS7P47929 136 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CD83Q01151 205 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CATR1Q13166 79 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 MSMO1Q15800 293 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ACTBL2Q562R1 376 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CXorf66Q5JRM2 361 aaPredicted RBP8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SNX29P2Q8IUI4 249 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TCTEX1D1Q8N7M0 179 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 OSR1Q8TAX0 266 aaPredicted RBP8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SECTM1Q8WVN6 248 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SNAPC3Q92966 411 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 R3HDM4Q96D70 268 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 NOL4LQ96MY1 436 aaPredicted RBP8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 HSPB9Q9BQS6 159 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 OR51J1Q9H342 316 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 FBXL15Q9H469 300 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 RABL2AQ9UBK7 228 aaPredicted RBP8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 EXTL2Q9UBQ6 330 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 RABL2BQ9UNT1 228 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 RBMX2Q9Y388 322 aaKnown RBP8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TRRAPQ9Y4A5 3859 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 VWFP04275 2813 aa8.17□□□□□ -1.1
HLA-DQB1-206ENST00000443574 NUDT19A8MXV4 375 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 J3QRK9 145 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TUSC2O75896 110 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 IGKV1-16P04430 117 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 PTHLHP12272 177 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 AADACP22760 399 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CNTFRP26992 372 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 S100GP29377 79 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CD40LGP29965 261 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 KIR2DS2P43631 304 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 FXYD4P59646 89 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 MRPS10P82664 201 aaKnown RBP8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TMEM267Q0VDI3 215 aaPredicted RBP8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SPCS2Q15005 226 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 VMA21Q3ZAQ7 101 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ZNF660Q6AZW8 331 aaPredicted RBP8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ZNF66Q6ZN08 573 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 OVCH2Q7RTZ1 564 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ZNF329Q86UD4 541 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TMEM17Q86X19 198 aa8.16□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ZBTB34Q8NCN2 500 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms