RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 MBD3L4A6NDZ8 208 aaPredicted RBP8.9□□□□□ -0.98
CALD1-210ENST00000443197 MBD3L3A6NE82 208 aaPredicted RBP8.9□□□□□ -0.98
CALD1-210ENST00000443197 MBD3L5A6NJ08 208 aaPredicted RBP8.9□□□□□ -0.98
CALD1-210ENST00000443197 MARCH11A6NNE9 402 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 NCBP2LA6PVI3 153 aaKnown RBP8.9□□□□□ -0.98
CALD1-210ENST00000443197 RAB29O14966 203 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 TNFSF13O75888 250 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 SNRPCP09234 159 aaKnown RBP8.9□□□□□ -0.98
CALD1-210ENST00000443197 TIMP3P35625 211 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 NBL1P41271 181 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 DVL1P1P54792 670 aaPredicted RBP8.9□□□□□ -0.98
CALD1-210ENST00000443197 CBLN2Q8IUK8 224 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 MBD3L2Q8NHZ7 208 aaPredicted RBP8.9□□□□□ -0.98
CALD1-210ENST00000443197 SLC35E1Q96K37 410 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 ZNF714Q96N38 554 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 MAP1LC3BQ9GZQ8 125 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 SMCO4Q9NRQ5 59 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 PLSCR2Q9NRY7 297 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 RNF115Q9Y4L5 304 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 CDK2AP1O14519 115 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 TGIF2LYQ8IUE0 185 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 TGIF2LXQ8IUE1 241 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 ZBTB34Q8NCN2 500 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 ZNF251Q9BRH9 671 aa8.9□□□□□ -0.98
CALD1-210ENST00000443197 SPTBN5Q9NRC6 3674 aaKnown RBP8.9□□□□□ -0.98
CALD1-210ENST00000443197 MED12LQ86YW9 2145 aa8.9□□□□□ -0.99
CALD1-210ENST00000443197 IGSF23A1L1A6 192 aa8.9□□□□□ -0.99
CALD1-210ENST00000443197 NAPSAO96009 420 aa8.9□□□□□ -0.99
CALD1-210ENST00000443197 IGKV3-15P01624 115 aa8.9□□□□□ -0.99
CALD1-210ENST00000443197 UCP1P25874 307 aa8.9□□□□□ -0.99
CALD1-210ENST00000443197 ACOT6Q3I5F7 207 aaPredicted RBP8.9□□□□□ -0.99
CALD1-210ENST00000443197 ZNF497Q6ZNH5 498 aa8.9□□□□□ -0.99
CALD1-210ENST00000443197 STPG2Q8N412 459 aa8.9□□□□□ -0.99
CALD1-210ENST00000443197 USB1Q9BQ65 265 aaKnown RBP8.9□□□□□ -0.99
CALD1-210ENST00000443197 PATZ1Q9HBE1 687 aaKnown RBP8.9□□□□□ -0.99
CALD1-210ENST00000443197 CFAP54Q96N23 3096 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.89□□□□□ -0.99
CALD1-210ENST00000443197 NUDT19A8MXV4 375 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 RAMP3O60896 148 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 IGLV3-1P01715 115 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 MUC1P15941 1255 aaPredicted RBP8.89□□□□□ -0.99
CALD1-210ENST00000443197 BTNL8Q6UX41 500 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 OR10G4Q8NGN3 311 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 OR10G9Q8NGN4 311 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 OR10G7Q8NGN6 311 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 RBKSQ9H477 322 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 DOK5Q9P104 306 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 MMP24Q9Y5R2 645 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 IGHV3-21A0A0B4J1V1 117 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 RAB19A4D1S5 217 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 K7N7A8 449 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 YIF1AO95070 293 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 CCL3L1P16619 93 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 EGR1P18146 543 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 MPZP25189 248 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 OPRK1P41145 380 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 GUCA2BQ16661 112 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 ZDHHC16Q969W1 377 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 ISOC2Q96AB3 205 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 BSCL2Q96G97 398 aaPredicted RBP8.89□□□□□ -0.99
CALD1-210ENST00000443197 SMIM7Q9BQ49 75 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 BIN3Q9NQY0 253 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 SEC11BP0C7V7 166 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 CD200P41217 278 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 HERPUD1Q15011 391 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 HMGN3Q15651 99 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 MISP3Q96FF7 219 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 WFIKKN1Q96NZ8 548 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 ELOVL5Q9NYP7 299 aa8.89□□□□□ -0.99
CALD1-210ENST00000443197 C17orf100A8MU93 164 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 OR2C1O95371 312 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 SUB1P53999 127 aaKnown RBP eCLIP8.88□□□□□ -0.99
CALD1-210ENST00000443197 UQCC3Q6UW78 93 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 WDR86Q86TI4 376 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 LYRM2Q9NU23 88 aaPredicted RBP8.88□□□□□ -0.99
CALD1-210ENST00000443197 IL19Q9UHD0 177 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 FAM215AQ9Y5M1 114 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 INSIG2Q9Y5U4 225 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 DUXBA0A1W2PPF3 345 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 IFNL4K9M1U5 179 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 IGHV1-46P01743 117 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 IGHV3-48P01763 117 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 VMA21Q3ZAQ7 101 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 ABHD12Q8N2K0 398 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 FLYWCH2Q96CP2 140 aaKnown RBP8.88□□□□□ -0.99
CALD1-210ENST00000443197 OR4C12Q96R67 309 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 CELSR3Q9NYQ7 3312 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 IGHV1-69-2A0A0G2JMI3 117 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 J3QR06 171 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 HPRT1P00492 218 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 ARG1P05089 322 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 HLA-GP17693 338 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 SULT1A2P50226 295 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 TNXAQ16473 311 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 LYPD6Q86Y78 171 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 NEUROG1Q92886 237 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 POM121Q96HA1 1249 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 TMEM147Q9BVK8 224 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 KIAA1456Q9P272 454 aa8.88□□□□□ -0.99
CALD1-210ENST00000443197 HILPDAQ9Y5L2 63 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms