RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 CLPSL1A2RUU4 121 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 OR5H14A6NHG9 310 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 IGKV1-16P04430 117 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 DUTP33316 252 aaKnown RBP12.73□□□□□ -0.37
USP39-205ENST00000442708 S100A5P33763 92 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 KRTAP10-3P60369 221 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 ACTBP60709 375 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 RPL30P62888 115 aaKnown RBP12.73□□□□□ -0.37
USP39-205ENST00000442708 CNPY1Q3B7I2 92 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 TMEM95Q3KNT9 176 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 TMEM229BQ8NBD8 167 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 PRSS22Q9GZN4 317 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 SLC5A7Q9GZV3 580 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 FXYD6Q9H0Q3 95 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 BEX1Q9HBH7 125 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 SERTAD4Q9NUC0 356 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 RABL2AQ9UBK7 228 aaPredicted RBP12.73□□□□□ -0.37
USP39-205ENST00000442708 RABL2BQ9UNT1 228 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 WASHC3Q9Y3C0 194 aa12.73□□□□□ -0.37
USP39-205ENST00000442708 NCBP2LA6PVI3 153 aaKnown RBP12.72□□□□□ -0.37
USP39-205ENST00000442708 CD74P04233 296 aa12.72□□□□□ -0.37
USP39-205ENST00000442708 MC5RP33032 325 aa12.72□□□□□ -0.37
USP39-205ENST00000442708 PROK1P58294 105 aa12.72□□□□□ -0.37
USP39-205ENST00000442708 VAX1Q5SQQ9 334 aa12.72□□□□□ -0.37
USP39-205ENST00000442708 TMEM17Q86X19 198 aa12.72□□□□□ -0.37
USP39-205ENST00000442708 FAM71E2Q8N5Q1 922 aa12.72□□□□□ -0.37
USP39-205ENST00000442708 MOB3AQ96BX8 217 aa12.72□□□□□ -0.37
USP39-205ENST00000442708 AKR1E2Q96JD6 320 aa12.72□□□□□ -0.37
USP39-205ENST00000442708 RNF114Q9Y508 228 aa12.72□□□□□ -0.37
USP39-205ENST00000442708 LINC01548A6NM66 108 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 H7C2Y5 167 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 FGF16O43320 207 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 GNRHRP30968 328 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 ETV6P41212 452 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 THBS3P49746 956 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 BRWD1-AS2P59051 145 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 HERV-K104P61576 105 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 SSBP1Q04837 148 aaKnown RBP12.71□□□□□ -0.37
USP39-205ENST00000442708 SRSF4Q08170 494 aaKnown RBP12.71□□□□□ -0.37
USP39-205ENST00000442708 ACTBL2Q562R1 376 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 PYDC2Q56P42 97 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 FAAP20Q6NZ36 180 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 C12orf54Q6X4T0 127 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 ZNF818PQ6ZRF7 136 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 BVESQ8NE79 360 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 SLC35D1Q9NTN3 355 aa12.71□□□□□ -0.37
USP39-205ENST00000442708 M0QZK8 103 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 TNFSF12O43508 249 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 PEX14O75381 377 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 SLC22A5O76082 557 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 ZNF735P0CB33 412 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 TAS2R19P59542 299 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 TSPAN5P62079 268 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 MMDQ15546 238 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 RNASE10Q5GAN6 216 aaKnown RBP12.7□□□□□ -0.38
USP39-205ENST00000442708 AADACL3Q5VUY0 350 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 STEAP1BQ6NZ63 245 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 PDPNQ86YL7 162 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 NPBQ8NG41 125 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 OR6F1Q8NGZ6 308 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 OR2T6Q8NHC8 308 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 WFDC12Q8WWY7 111 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 TRIM63Q969Q1 353 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 THAP7Q9BT49 309 aaPredicted RBP12.7□□□□□ -0.38
USP39-205ENST00000442708 TAS2R8Q9NYW2 309 aa12.7□□□□□ -0.38
USP39-205ENST00000442708 ZNF107Q9UII5 783 aaPredicted RBP12.7□□□□□ -0.38
USP39-205ENST00000442708 A0A1B0GUS0 222 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 ANKRD20A5PA0PJZ0 165 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 NBR2O15453 112 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 NDUFA3O95167 84 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 RAB3DO95716 219 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 APOA2P02652 100 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 CSF1P09603 554 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 TBPP20226 339 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 PTBP1P26599 531 aaKnown RBP eCLIP12.69□□□□□ -0.38
USP39-205ENST00000442708 MSMO1Q15800 293 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 OR2B11Q5JQS5 317 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 C9orf152Q5JTZ5 239 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 LHFPL1Q86WI0 220 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 MFSD4AQ8N468 514 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 OR8H1Q8NGG4 311 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 MRGPRFQ96AM1 343 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 ADTRPQ96IZ2 230 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 SDHCQ99643 169 aaPredicted RBP12.69□□□□□ -0.38
USP39-205ENST00000442708 HSPB9Q9BQS6 159 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 SRRQ9GZT4 340 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 BATF3Q9NR55 127 aa12.69□□□□□ -0.38
USP39-205ENST00000442708 PLXNB1O43157 2135 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 SRRM4A7MD48 611 aaKnown RBP12.68□□□□□ -0.38
USP39-205ENST00000442708 HAX1O00165 279 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 IGLV2-23P01705 113 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 RPS16P62249 146 aaKnown RBP12.68□□□□□ -0.38
USP39-205ENST00000442708 PSG5Q15238 335 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 C5orf64Q2M2E5 130 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 SPANXN2Q5MJ10 180 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 HIST2H2BDQ6DRA6 164 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 KCTD9Q7L273 389 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 Q8N402 240 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 OR4C16Q8NGL9 310 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 HSD17B10Q99714 261 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms