RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 CTXND1A0A1B0GTU2 59 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 PTBP3O95758 552 aaKnown RBP13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 HBZP02008 142 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 NUBP1P53384 320 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 ARG2P78540 354 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 AESQ08117 197 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 USF2Q15853 346 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 TMEM241Q24JQ0 296 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 C4orf17Q53FE4 359 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 RNFT1Q5M7Z0 435 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 CYB5R2Q6BCY4 276 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 CXorf67Q86X51 503 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 SLC25A22Q9H936 323 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 OR5H1A6NKK0 313 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 HMGB3O15347 200 aaKnown RBP13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 S1PR2O95136 353 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 P0C879 139 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 GABRA2P47869 451 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 C21orf62-AS1Q17RA5 79 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 KLF14Q8TD94 323 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 DTD1Q8TEA8 209 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 TMEM250H0YL14 139 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 RBMXL2O75526 392 aaKnown RBP13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 KBTBD11O94819 623 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 FGF7P21781 194 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 NUTF2P61970 127 aaKnown RBP13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 OR10G9Q8NGN4 311 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 OR10G7Q8NGN6 311 aa13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 CIB3Q96Q77 187 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-207ENST00000441915 DOCK11Q5JSL3 2073 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 MKRN2OSH3BPM6 223 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 WNT9BO14905 357 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 ZG16O60844 167 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 EIF4EBP1Q13541 118 aaPredicted RBP13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 ZNF826PQ6ZT77 177 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 ARL6IP6Q8N6S5 226 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 TMEM178AQ8NBL3 297 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 RPUSD4Q96CM3 377 aaKnown RBP13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 C5orf30Q96GV9 206 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 GPR179Q6PRD1 2367 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 C17orf98A8MV24 154 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 TNFSF15O95150 251 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 MPV17P39210 176 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 BSXQ3C1V8 233 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 INO80CQ6PI98 192 aaPredicted RBP13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 GCNT2Q8N0V5 402 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 OR10A7Q8NGE5 316 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 GUCD1Q96NT3 240 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 ZDHHC11Q9H8X9 412 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 LAMP3Q9UQV4 416 aa13.83□□□□□ -0.2
SEMA3B-207ENST00000441915 TECTAO75443 2155 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 PMS2P5A8MQ11 134 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 C1QTNF9BB2RNN3 333 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 CLDN14O95500 239 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 COX5AP20674 150 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 FAM53AQ6NSI3 398 aaPredicted RBP13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 BTNL3Q6UXE8 466 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 H2BFWTQ7Z2G1 175 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 TCTEX1D1Q8N7M0 179 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 MRGPRDQ8TDS7 321 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 CBY1Q9Y3M2 126 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 RAB29O14966 203 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 MLNRO43193 412 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 CD59P13987 128 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 FABP4P15090 132 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 FFAR4Q5NUL3 377 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 ZNF709Q8N972 641 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 ACTR3CQ9C0K3 210 aaPredicted RBP13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 MANBALQ9NQG1 85 aa13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 COLQQ9Y215 455 aaPredicted RBP13.82□□□□□ -0.2
SEMA3B-207ENST00000441915 PHOX2AO14813 284 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 BRWD1-AS2P59051 145 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 C16orf82Q7Z2V1 217 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 COQ2Q96H96 371 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 SNX22Q96L94 193 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 NPCDR1Q9BY65 106 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 PARLQ9H300 379 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 RPL23P62829 140 aaKnown RBP13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 TLE1Q04724 770 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 ATP1A1-AS1Q5TC04 95 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 ACP7Q6ZNF0 438 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 C11orf53Q8IXP5 236 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 OR4F5Q8NH21 305 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 OR4F4Q96R69 305 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 SRD5A3Q9H8P0 318 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 PITPNC1Q9UKF7 332 aa13.81□□□□□ -0.2
SEMA3B-207ENST00000441915 HOXC12P31275 282 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 DHRS13Q6UX07 377 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 Q6ZT83 130 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 RAB24Q969Q5 203 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 OR5B12Q96R08 314 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 TAAR6Q96RI8 345 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 CXXC4Q9H2H0 198 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 NCOR1O75376 2440 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 PFN1P07737 140 aaKnown RBP13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 HOXA4Q00056 320 aaPredicted RBP13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 TFF3Q07654 80 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 ZNF66Q6ZN08 573 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms