RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 DIRAS3O95661 229 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 APOA2P02652 100 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 RAB6AP20340 208 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 SLURP1P55000 103 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 RPS16P62249 146 aaKnown RBP12.99□□□□□ -0.33
COL16A1-204ENST00000440437 SSBP2P81877 361 aaPredicted RBP12.99□□□□□ -0.33
COL16A1-204ENST00000440437 ACTBL2Q562R1 376 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 IGSF11Q5DX21 431 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 UNQ5815/PRO19632Q6UWF5 114 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 OR10R2Q8NGX6 335 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 ABHD5Q8WTS1 349 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 DLX4Q92988 240 aaPredicted RBP12.99□□□□□ -0.33
COL16A1-204ENST00000440437 C5orf30Q96GV9 206 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 WWC2-AS2Q96NR7 200 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 OR2D2Q9H210 308 aa12.99□□□□□ -0.33
COL16A1-204ENST00000440437 IGHV4OR15-8A0A075B7B6 117 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 A0A087WW49 117 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 TRBV6-7A0A0A0MS04 114 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 TRDV1A0A1B0GX56 115 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 M0R1X1 148 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 ARPC1BO15143 372 aaKnown RBP12.98□□□□□ -0.33
COL16A1-204ENST00000440437 BET1O15155 118 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 IGLV2-23P01705 113 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 GSTT2P0CG29 244 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 GSTT2BP0CG30 244 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 HIST1H1DP16402 221 aaKnown RBP12.98□□□□□ -0.33
COL16A1-204ENST00000440437 GNB3P16520 340 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 RAB3BP20337 219 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 MYL9P24844 172 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 MRPS15P82914 257 aaKnown RBP12.98□□□□□ -0.33
COL16A1-204ENST00000440437 NR2C2APQ86WQ0 139 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 ARPC1AQ92747 370 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 SLC35D1Q9NTN3 355 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 SDHAF2Q9NX18 166 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 RAB26Q9ULW5 256 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 SORL1Q92673 2214 aa12.98□□□□□ -0.33
COL16A1-204ENST00000440437 A0A0B4J203 849 aa12.97□□□□□ -0.33
COL16A1-204ENST00000440437 SLC25A17O43808 307 aa12.97□□□□□ -0.33
COL16A1-204ENST00000440437 OR8U9P0C7N5 309 aa12.97□□□□□ -0.33
COL16A1-204ENST00000440437 NHLRC4P0CG21 123 aaPredicted RBP12.97□□□□□ -0.33
COL16A1-204ENST00000440437 GALP22466 123 aa12.97□□□□□ -0.33
COL16A1-204ENST00000440437 GADD45AP24522 165 aa12.97□□□□□ -0.33
COL16A1-204ENST00000440437 GABARAPL2P60520 117 aa12.97□□□□□ -0.33
COL16A1-204ENST00000440437 ZNF429Q86V71 674 aa12.97□□□□□ -0.33
COL16A1-204ENST00000440437 OR10J5Q8NHC4 309 aa12.97□□□□□ -0.33
COL16A1-204ENST00000440437 MAFIPQ8WZ33 124 aa12.97□□□□□ -0.33
COL16A1-204ENST00000440437 FLYWCH2Q96CP2 140 aaKnown RBP12.97□□□□□ -0.33
COL16A1-204ENST00000440437 RHOVQ96L33 236 aa12.97□□□□□ -0.33
COL16A1-204ENST00000440437 SLA2Q9H6Q3 261 aa12.97□□□□□ -0.33
COL16A1-204ENST00000440437 IGHV3-11P01762 117 aa12.96□□□□□ -0.33
COL16A1-204ENST00000440437 CRYGBP07316 175 aa12.96□□□□□ -0.33
COL16A1-204ENST00000440437 TPPP2P59282 170 aa12.96□□□□□ -0.33
COL16A1-204ENST00000440437 FXYD3Q14802 87 aa12.96□□□□□ -0.33
COL16A1-204ENST00000440437 SRSF7Q16629 238 aaKnown RBP eCLIP12.96□□□□□ -0.33
COL16A1-204ENST00000440437 C22orf42Q6IC83 251 aa12.96□□□□□ -0.33
COL16A1-204ENST00000440437 Q6ZS49 121 aa12.96□□□□□ -0.33
COL16A1-204ENST00000440437 MS4A10Q96PG2 267 aa12.96□□□□□ -0.33
COL16A1-204ENST00000440437 ZNF230Q9UIE0 474 aaPredicted RBP12.96□□□□□ -0.33
COL16A1-204ENST00000440437 HUWE1Q7Z6Z7 4374 aaKnown RBP12.95□□□□□ -0.34
COL16A1-204ENST00000440437 A0A075B6Q4 140 aa12.95□□□□□ -0.34
COL16A1-204ENST00000440437 MRPS14O60783 128 aaKnown RBP12.95□□□□□ -0.34
COL16A1-204ENST00000440437 SAP30O75446 220 aa12.95□□□□□ -0.34
COL16A1-204ENST00000440437 UBE2UQ5VVX9 321 aa12.95□□□□□ -0.34
COL16A1-204ENST00000440437 ACSM6Q6P461 480 aa12.95□□□□□ -0.34
COL16A1-204ENST00000440437 GRPEL2Q8TAA5 225 aa12.95□□□□□ -0.34
COL16A1-204ENST00000440437 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.95□□□□□ -0.34
COL16A1-204ENST00000440437 IGKV1D-8A0A087WSZ0 117 aa12.94□□□□□ -0.34
COL16A1-204ENST00000440437 METTL21EPA6NDL7 271 aa12.94□□□□□ -0.34
COL16A1-204ENST00000440437 H3BUA1 57 aa12.94□□□□□ -0.34
COL16A1-204ENST00000440437 LY86O95711 162 aa12.94□□□□□ -0.34
COL16A1-204ENST00000440437 HSPB1P04792 205 aaKnown RBP12.94□□□□□ -0.34
COL16A1-204ENST00000440437 LGALS7P47929 136 aa12.94□□□□□ -0.34
COL16A1-204ENST00000440437 PJVKQ0ZLH3 352 aa12.94□□□□□ -0.34
COL16A1-204ENST00000440437 TMEM177Q53S58 311 aa12.94□□□□□ -0.34
COL16A1-204ENST00000440437 H1FOOQ8IZA3 346 aaPredicted RBP12.94□□□□□ -0.34
COL16A1-204ENST00000440437 POC5Q8NA72 575 aa12.94□□□□□ -0.34
COL16A1-204ENST00000440437 DDB2Q92466 427 aa12.94□□□□□ -0.34
COL16A1-204ENST00000440437 HARBI1Q96MB7 349 aa12.94□□□□□ -0.34
COL16A1-204ENST00000440437 ELF5Q9UKW6 265 aaPredicted RBP12.94□□□□□ -0.34
COL16A1-204ENST00000440437 U3KQK5 164 aa12.94□□□□□ -0.34
COL16A1-204ENST00000440437 TENM3Q9P273 2699 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 SMIM30A4D0T7 59 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 ERICH4A6NGS2 130 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 SRRM4A7MD48 611 aaKnown RBP12.93□□□□□ -0.34
COL16A1-204ENST00000440437 TRGV3P03979 118 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 CD40LGP29965 261 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 FGF9P31371 208 aaPredicted RBP12.93□□□□□ -0.34
COL16A1-204ENST00000440437 TAGLNQ01995 201 aaKnown RBP12.93□□□□□ -0.34
COL16A1-204ENST00000440437 ARFRP1Q13795 201 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 MRGPRG-AS1Q2M3A8 158 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 SPARTQ8N0X7 666 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 BVESQ8NE79 360 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 GINS4Q9BRT9 223 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 RYR3Q15413 4870 aa12.93□□□□□ -0.34
COL16A1-204ENST00000440437 SPNP16150 400 aa12.92□□□□□ -0.34
COL16A1-204ENST00000440437 DTYMKP23919 212 aa12.92□□□□□ -0.34
COL16A1-204ENST00000440437 DUTP33316 252 aaKnown RBP12.92□□□□□ -0.34
COL16A1-204ENST00000440437 PITPNAQ00169 270 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms