RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 C18orf65Q6ZTR6 163 aa18.54■□□□□ 0.56
VARS-217ENST00000440048 HOGA1Q86XE5 327 aa18.54■□□□□ 0.56
VARS-217ENST00000440048 BEST4Q8NFU0 473 aa18.54■□□□□ 0.56
VARS-217ENST00000440048 FLYWCH2Q96CP2 140 aaKnown RBP18.54■□□□□ 0.56
VARS-217ENST00000440048 TSNAXQ99598 290 aaKnown RBP18.54■□□□□ 0.56
VARS-217ENST00000440048 WSB1Q9Y6I7 421 aa18.54■□□□□ 0.56
VARS-217ENST00000440048 G3V4G9 280 aa18.53■□□□□ 0.56
VARS-217ENST00000440048 FCN1O00602 326 aa18.53■□□□□ 0.56
VARS-217ENST00000440048 GABARAPO95166 117 aa18.53■□□□□ 0.56
VARS-217ENST00000440048 IGHG4P01861 327 aa18.53■□□□□ 0.56
VARS-217ENST00000440048 HLA-DQB1P01920 261 aa18.53■□□□□ 0.56
VARS-217ENST00000440048 OR5H8P0DN80 308 aa18.53■□□□□ 0.56
VARS-217ENST00000440048 THBS3P49746 956 aa18.53■□□□□ 0.56
VARS-217ENST00000440048 LUMP51884 338 aaPredicted RBP18.53■□□□□ 0.56
VARS-217ENST00000440048 CTF1Q16619 201 aa18.53■□□□□ 0.56
VARS-217ENST00000440048 LCNL1Q6ZST4 164 aa18.53■□□□□ 0.56
VARS-217ENST00000440048 METTL1Q9UBP6 276 aaKnown RBP18.53■□□□□ 0.56
VARS-217ENST00000440048 G3V318 75 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 SPDEFO95238 335 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 PF4P02776 101 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 RPLP1P05386 114 aaKnown RBP18.52■□□□□ 0.56
VARS-217ENST00000440048 ELANEP08246 267 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 ALDH3B2P48448 385 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 ARPC4P59998 168 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 CX3CL1P78423 397 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 NDPQ00604 133 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 CXorf66Q5JRM2 361 aaPredicted RBP18.52■□□□□ 0.56
VARS-217ENST00000440048 TMEM69Q5SWH9 247 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 GPR107Q5VW38 600 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 ZNF660Q6AZW8 331 aaPredicted RBP18.52■□□□□ 0.56
VARS-217ENST00000440048 RNF152Q8N8N0 203 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 BVESQ8NE79 360 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 COMMD3Q9UBI1 195 aa18.52■□□□□ 0.56
VARS-217ENST00000440048 IGKV1D-13A0A0B4J2D9 117 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 TUSC2O75896 110 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 FCER2P06734 321 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 IGKV1-13P0DP09 117 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 PPIFP30405 207 aaKnown RBP18.51■□□□□ 0.55
VARS-217ENST00000440048 DUTP33316 252 aaKnown RBP18.51■□□□□ 0.55
VARS-217ENST00000440048 CBX5P45973 191 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 TAS2R20P59543 309 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 TAGLNQ01995 201 aaKnown RBP18.51■□□□□ 0.55
VARS-217ENST00000440048 SAMD5Q5TGI4 173 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 ZNF645Q8N7E2 425 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 KLHL30-AS1Q8NEE0 82 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 WFDC9Q8NEX5 89 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 DDB2Q92466 427 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 ADTRPQ96IZ2 230 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 CLCC1Q96S66 551 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 FBXO7Q9Y3I1 522 aa18.51■□□□□ 0.55
VARS-217ENST00000440048 TRAV41A0A0B4J266 112 aa18.5■□□□□ 0.55
VARS-217ENST00000440048 MEIS3P1A6NDR6 274 aa18.5■□□□□ 0.55
VARS-217ENST00000440048 NUDT19A8MXV4 375 aa18.5■□□□□ 0.55
VARS-217ENST00000440048 SLC25A17O43808 307 aa18.5■□□□□ 0.55
VARS-217ENST00000440048 EIF4EP06730 217 aaKnown RBP18.5■□□□□ 0.55
VARS-217ENST00000440048 ETV3LQ6ZN32 361 aa18.5■□□□□ 0.55
VARS-217ENST00000440048 C8orf86Q6ZUL3 223 aa18.5■□□□□ 0.55
VARS-217ENST00000440048 SNAPC3Q92966 411 aa18.5■□□□□ 0.55
VARS-217ENST00000440048 LINC00473A8K010 186 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 IGLV2-23P01705 113 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 RRASP10301 218 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 CD33P20138 364 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 PSMB8P28062 276 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 SLC6A1P30531 599 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 RORCP51449 518 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 CBX3Q13185 183 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 RTL8BQ17RB0 113 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 TMEM177Q53S58 311 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 GPR141Q7Z602 305 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 ZNF695Q8IW36 515 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 ACOT12Q8WYK0 555 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 TPSG1Q9NRR2 321 aa18.49■□□□□ 0.55
VARS-217ENST00000440048 SLC22A5O76082 557 aa18.48■□□□□ 0.55
VARS-217ENST00000440048 CA2P00918 260 aa18.48■□□□□ 0.55
VARS-217ENST00000440048 IGLV2-14P01704 120 aa18.48■□□□□ 0.55
VARS-217ENST00000440048 APOA1P02647 267 aa18.48■□□□□ 0.55
VARS-217ENST00000440048 EGR2P11161 476 aaPredicted RBP18.48■□□□□ 0.55
VARS-217ENST00000440048 LGALS7P47929 136 aa18.48■□□□□ 0.55
VARS-217ENST00000440048 CRIP2P52943 208 aaPredicted RBP18.48■□□□□ 0.55
VARS-217ENST00000440048 BEAN1Q3B7T3 259 aa18.48■□□□□ 0.55
VARS-217ENST00000440048 OXLD1Q5BKU9 147 aa18.48■□□□□ 0.55
VARS-217ENST00000440048 HARBI1Q96MB7 349 aa18.48■□□□□ 0.55
VARS-217ENST00000440048 CMTM3Q96MX0 182 aa18.48■□□□□ 0.55
VARS-217ENST00000440048 IFT46Q9NQC8 304 aa18.48■□□□□ 0.55
VARS-217ENST00000440048 NECAP2Q9NVZ3 263 aa18.48■□□□□ 0.55
VARS-217ENST00000440048 RBMX2Q9Y388 322 aaKnown RBP18.48■□□□□ 0.55
VARS-217ENST00000440048 SHOXO15266 292 aa18.47■□□□□ 0.55
VARS-217ENST00000440048 AADACP22760 399 aa18.47■□□□□ 0.55
VARS-217ENST00000440048 FCGR2CP31995 323 aa18.47■□□□□ 0.55
VARS-217ENST00000440048 CDX1P47902 265 aaPredicted RBP18.47■□□□□ 0.55
VARS-217ENST00000440048 ECSCRQ19T08 205 aa18.47■□□□□ 0.55
VARS-217ENST00000440048 C19orf54Q5BKX5 351 aa18.47■□□□□ 0.55
VARS-217ENST00000440048 ZNF562Q6V9R5 426 aa18.47■□□□□ 0.55
VARS-217ENST00000440048 MINDY2Q8NBR6 621 aa18.47■□□□□ 0.55
VARS-217ENST00000440048 OR5AP2Q8NGF4 316 aa18.47■□□□□ 0.55
VARS-217ENST00000440048 ABHD5Q8WTS1 349 aa18.47■□□□□ 0.55
VARS-217ENST00000440048 PRKDCP78527 4128 aaKnown RBP18.47■□□□□ 0.55
VARS-217ENST00000440048 SRRM4A7MD48 611 aaKnown RBP18.46■□□□□ 0.55
VARS-217ENST00000440048 IGLV1-40P01703 118 aa18.46■□□□□ 0.55
VARS-217ENST00000440048 CRYGBP07316 175 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms