RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 EGR1P18146 543 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 COL8A2P25067 703 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 SERF2P84101 59 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 GABRA6Q16445 453 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 MRGPRGQ86SM5 289 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 C1orf87Q8N0U7 546 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 VKORC1L1Q8N0U8 176 aa11.35□□□□□ -0.59
HERPUD1-204ENST00000439977 LRRC30A6NM36 301 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 PPP1R2P9O14990 202 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 CYB5R3P00387 301 aaPredicted RBP11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 IGHV2-70P01814 119 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 S100PP25815 95 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 COL10A1Q03692 680 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 FOXF2Q12947 444 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 GCSAMLQ5JQS6 135 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 TMEM14EPQ6UXP3 125 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 DTD1Q8TEA8 209 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 GMPPAQ96IJ6 420 aaPredicted RBP11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 GALR2O43603 387 aaPredicted RBP11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 ZNF883P0CG24 379 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 FFAR4Q5NUL3 377 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 ZNF383Q8NA42 475 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 OR10G4Q8NGN3 311 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 OR10G9Q8NGN4 311 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 OR10G7Q8NGN6 311 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 OR4F5Q8NH21 305 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 OR4F4Q96R69 305 aa11.34□□□□□ -0.59
HERPUD1-204ENST00000439977 ADGRG4Q8IZF6 3080 aa11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 CXorf65A6NEN9 183 aa11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 IQCF6A8MYZ5 107 aa11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 LY86O95711 162 aa11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 MEF2BQ02080 365 aaPredicted RBP11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 HSPB7Q9UBY9 170 aa11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 FAM214BQ7L5A3 538 aa11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 H2BFWTQ7Z2G1 175 aa11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 OR10P1Q8NGE3 313 aa11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 ELOVL1Q9BW60 279 aa11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 GAB2Q9UQC2 676 aa11.33□□□□□ -0.6
HERPUD1-204ENST00000439977 RNF212BA8MTL3 300 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 SOX15O60248 233 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 HOXC12P31275 282 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 TNFSF10P50591 281 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 MSMO1Q15800 293 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 NCR3LG1Q68D85 454 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 FIP1L1Q6UN15 594 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 WDR82Q6UXN9 313 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 C16orf82Q7Z2V1 217 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 FDCSPQ8NFU4 85 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 ZDHHC11Q9H8X9 412 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 DUSP13Q9UII6 198 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 PAGE4O60829 102 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 UBE2G2P60604 165 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 ACP7Q6ZNF0 438 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 TMEM178AQ8NBL3 297 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 OR51G1Q8NGK1 321 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 RAB24Q969Q5 203 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 PINX1Q96BK5 328 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 HIPK2Q9H2X6 1198 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 SMCO3A2RU48 225 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 OOEPA6NGQ2 149 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 B4DEV8 164 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 CRYAAP02489 173 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 HIST3H2BBQ8N257 126 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 C9orf106Q8NAJ2 232 aa11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 QTRT1Q9BXR0 403 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 RYDENQ9NUL5 291 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-204ENST00000439977 GVINP1Q7Z2Y8 2422 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 IGHV3OR15-7A0A075B7D8 119 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 TRAV38-1A0A0B4J264 116 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 IFNA1P01562 189 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 CECR9P0C854 216 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 PNRC1Q12796 327 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 CATR1Q13166 79 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 TMEM241Q24JQ0 296 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 Q6ZT83 130 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 SDSLQ96GA7 329 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 PARLQ9H300 379 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 LAMP3Q9UQV4 416 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 PIGBOS1A0A0B4J2F0 54 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 C1QTNF9BB2RNN3 333 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 FCGR3BO75015 233 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 KIR2DL2P43627 348 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 PSMB3P49720 205 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 UTF1Q5T230 341 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 LEAP2Q969E1 77 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 PFDN5Q99471 154 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 TMEM204Q9BSN7 226 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 NPCDR1Q9BY65 106 aa11.31□□□□□ -0.6
HERPUD1-204ENST00000439977 PMS2P5A8MQ11 134 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 SEC14L6B5MCN3 397 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 GZMHP20718 246 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 CD177Q8N6Q3 437 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 WDR31Q8NA23 367 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 OR2Z1Q8NG97 314 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 LRRC29Q8WV35 223 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 TMEM147Q9BVK8 224 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 HES4Q9HCC6 221 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 A0A1W2PPQ1 181 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms