RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 AP4M1O00189 453 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 SPDEFO95238 335 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 PPYP01298 95 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 FCER2P06734 321 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 IGKV1-13P0DP09 117 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 AADACP22760 399 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 DUTP33316 252 aaKnown RBP9.35□□□□□ -0.91
HSPG2-206ENST00000439717 DYRK1AQ13627 763 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 RTL8BQ17RB0 113 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 C5orf64Q2M2E5 130 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 DHRS11Q6UWP2 260 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 LYSMD2Q8IV50 215 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 ZBTB34Q8NCN2 500 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 MCFD2Q8NI22 146 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 CHPT1Q8WUD6 406 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 FLYWCH2Q96CP2 140 aaKnown RBP9.35□□□□□ -0.91
HSPG2-206ENST00000439717 ABHD1Q96SE0 405 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 TSNAXQ99598 290 aaKnown RBP9.35□□□□□ -0.91
HSPG2-206ENST00000439717 C6orf62Q9GZU0 229 aaPredicted RBP9.35□□□□□ -0.91
HSPG2-206ENST00000439717 NXF2Q9GZY0 626 aaKnown RBP9.35□□□□□ -0.91
HSPG2-206ENST00000439717 EHFQ9NZC4 300 aa9.35□□□□□ -0.91
HSPG2-206ENST00000439717 RBMX2Q9Y388 322 aaKnown RBP9.35□□□□□ -0.91
HSPG2-206ENST00000439717 M0QZ24 198 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 RRHO14718 337 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 FBXO24O75426 580 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 IGLV2-14P01704 120 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 HLA-DRB1P01911 266 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 PMP2P02689 132 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 IGKV1-16P04430 117 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 CNTFRP26992 372 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 HLA-DMAP28067 261 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 LGALS7P47929 136 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 RFX2P48378 723 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 LINC00205P59089 165 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 HERV-K104P61576 105 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 RPS16P62249 146 aaKnown RBP9.34□□□□□ -0.91
HSPG2-206ENST00000439717 MRPS10P82664 201 aaKnown RBP9.34□□□□□ -0.91
HSPG2-206ENST00000439717 ACTBL2Q562R1 376 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 PRR31Q5SQ13 230 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 ZNF660Q6AZW8 331 aaPredicted RBP9.34□□□□□ -0.91
HSPG2-206ENST00000439717 PYHIN1Q6K0P9 492 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 LIN54Q6MZP7 749 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 OR5AU1Q8NGC0 362 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 FCAMRQ8WWV6 532 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 DDB2Q92466 427 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 BORCS5Q969J3 196 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 RBMXL1Q96E39 390 aaKnown RBP9.34□□□□□ -0.91
HSPG2-206ENST00000439717 HSD17B10Q99714 261 aaKnown RBP9.34□□□□□ -0.91
HSPG2-206ENST00000439717 GON7Q9BXV9 100 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 NDUFA13Q9P0J0 144 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 ZNF107Q9UII5 783 aaPredicted RBP9.34□□□□□ -0.91
HSPG2-206ENST00000439717 ZNF580Q9UK33 172 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 PRELID3BQ9Y3B1 194 aa9.34□□□□□ -0.91
HSPG2-206ENST00000439717 PSMB11A5LHX3 300 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 GABARAPH6UMI1 98 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 CD28P10747 220 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 TBPP20226 339 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 HRH1P35367 487 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 SLC35B1P78383 322 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 SSBP1Q04837 148 aaKnown RBP9.33□□□□□ -0.92
HSPG2-206ENST00000439717 EIF4EBP1Q13541 118 aaPredicted RBP9.33□□□□□ -0.92
HSPG2-206ENST00000439717 PSG5Q15238 335 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 C2orf68Q2NKX9 166 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 TMEM177Q53S58 311 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 ZNF66Q6ZN08 573 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 STPG2Q8N412 459 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 BVESQ8NE79 360 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 OR4X2Q8NGF9 303 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 OR6F1Q8NGZ6 308 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 OR52I2Q8NH67 350 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 SECTM1Q8WVN6 248 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 DIRAS2Q96HU8 199 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 HSPB9Q9BQS6 159 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 SLC5A7Q9GZV3 580 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 MMP27Q9H306 513 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 MTFP1Q9UDX5 166 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 A3GALT2U3KPV4 340 aa9.33□□□□□ -0.92
HSPG2-206ENST00000439717 LINC01548A6NM66 108 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 LINC00473A8K010 186 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 CTDSPLO15194 276 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 SHOXO15266 292 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 OPN1MWP04001 364 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 IGF1P05019 195 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 OPN1MW2P0DN77 364 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 OPN1MW3P0DN78 364 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 FXYD4P59646 89 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 PLGLAQ15195 96 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 VAX1Q5SQQ9 334 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 KCTD9Q7L273 389 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 NDUFA11Q86Y39 141 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 COMMD1Q8N668 190 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 C11orf44Q8N8P7 122 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 OSR1Q8TAX0 266 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-206ENST00000439717 MOB3AQ96BX8 217 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 HARBI1Q96MB7 349 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 NOL4LQ96MY1 436 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-206ENST00000439717 ZNF2Q9BSG1 426 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-206ENST00000439717 DCUN1D5Q9BTE7 237 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 OR51J1Q9H342 316 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 FBXL15Q9H469 300 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms