RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ZNF581Q9P0T4 197 aa13.5□□□□□ -0.25
DHFR-201ENST00000439211 IGHV3-64DA0A0J9YX35 117 aa13.49□□□□□ -0.25
DHFR-201ENST00000439211 LOC102725191A0A1B0GVB3 256 aa13.49□□□□□ -0.25
DHFR-201ENST00000439211 FKBP2P26885 142 aaKnown RBP13.49□□□□□ -0.25
DHFR-201ENST00000439211 OR51H1Q8NH63 302 aa13.49□□□□□ -0.25
DHFR-201ENST00000439211 ERRFI1Q9UJM3 462 aaPredicted RBP13.49□□□□□ -0.25
DHFR-201ENST00000439211 MYO15AQ9UKN7 3530 aa13.49□□□□□ -0.25
DHFR-201ENST00000439211 CACNA1GO43497 2377 aa13.49□□□□□ -0.25
DHFR-201ENST00000439211 WIPI1Q5MNZ9 446 aaPredicted RBP13.49□□□□□ -0.25
DHFR-201ENST00000439211 SGCZQ96LD1 299 aa13.49□□□□□ -0.25
DHFR-201ENST00000439211 DIDO1Q9BTC0 2240 aaKnown RBP13.49□□□□□ -0.25
DHFR-201ENST00000439211 C11orf94C9JXX5 98 aa13.49□□□□□ -0.25
DHFR-201ENST00000439211 M0R296 226 aa13.49□□□□□ -0.25
DHFR-201ENST00000439211 CCL4P13236 92 aa13.49□□□□□ -0.25
DHFR-201ENST00000439211 DSCR4P56555 118 aaPredicted RBP13.49□□□□□ -0.25
DHFR-201ENST00000439211 RELBQ01201 579 aa13.49□□□□□ -0.25
DHFR-201ENST00000439211 FAM19A2Q8N3H0 131 aa13.49□□□□□ -0.25
DHFR-201ENST00000439211 C1orf147Q96MC9 270 aaPredicted RBP13.49□□□□□ -0.25
DHFR-201ENST00000439211 NUDT16L1Q9BRJ7 211 aaKnown RBP13.49□□□□□ -0.25
DHFR-201ENST00000439211 SMAGPQ0VAQ4 97 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 TMEM186Q96B77 213 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 PYGO2Q9BRQ0 406 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 FBLN5Q9UBX5 448 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 FBXL7Q9UJT9 491 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 KCNS2Q9ULS6 477 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 SIT1Q9Y3P8 196 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 SPEM1Q8N4L4 309 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 FOXB1Q99853 325 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 SERTAD4Q9NUC0 356 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 PSENENQ9NZ42 101 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 OR2T8A6NH00 312 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 MRPL33O75394 65 aaKnown RBP13.48□□□□□ -0.25
DHFR-201ENST00000439211 GABRA6Q16445 453 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 LHFPL2Q6ZUX7 228 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 OR10P1Q8NGE3 313 aa13.48□□□□□ -0.25
DHFR-201ENST00000439211 HS3ST1O14792 307 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 MPPED1O15442 326 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 OR10G8Q8NGN5 311 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 RDH5Q92781 318 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 WNT16Q9UBV4 365 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 PXMP4Q9Y6I8 212 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 HLA-BQ31612 363 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 WDR5BQ86VZ2 330 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 LYPD6Q86Y78 171 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 ZNF611Q8N823 705 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 CHRDL1Q9BU40 450 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 CDC42EP3Q9UKI2 254 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 A0A1W2PPV4 95 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 SAP30O75446 220 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 TGFBR3Q03167 851 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 UBALD1Q8TB05 177 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 PNRC2Q9NPJ4 139 aaKnown RBP13.47□□□□□ -0.25
DHFR-201ENST00000439211 ZNF407Q9C0G0 2248 aa13.47□□□□□ -0.25
DHFR-201ENST00000439211 CORTO00230 105 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 GALR2O43603 387 aaPredicted RBP13.46□□□□□ -0.25
DHFR-201ENST00000439211 ZFP36L1Q07352 338 aaKnown RBP13.46□□□□□ -0.25
DHFR-201ENST00000439211 MKXQ8IYA7 352 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 Q96M66 194 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 ZNF703Q9H7S9 590 aaPredicted RBP13.46□□□□□ -0.25
DHFR-201ENST00000439211 CLCF1Q9UBD9 225 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 IGHV1-69-2A0A0G2JMI3 117 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 PGPEP1LA6NFU8 196 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 C1QTNF9BB2RNN3 333 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 TMEM250H0YL14 139 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 NDUFB4O95168 129 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 CLDN1O95832 211 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 HAND1O96004 215 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 PCBD1P61457 104 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 SLC35B1P78383 322 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 MPV17L2Q567V2 206 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 LCN12Q6JVE5 192 aa13.46□□□□□ -0.25
DHFR-201ENST00000439211 TOMM40O96008 361 aa13.46□□□□□ -0.26
DHFR-201ENST00000439211 USF1P22415 310 aaPredicted RBP13.46□□□□□ -0.26
DHFR-201ENST00000439211 RPS16P62249 146 aaKnown RBP13.46□□□□□ -0.26
DHFR-201ENST00000439211 DNASE2BQ8WZ79 361 aa13.46□□□□□ -0.26
DHFR-201ENST00000439211 CHCHD2Q9Y6H1 151 aaPredicted RBP13.46□□□□□ -0.26
DHFR-201ENST00000439211 OR5B21A6NL26 309 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 TRAPPC2LH3BP13 241 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 PDCD6O75340 191 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 EPHA8P29322 1005 aaPredicted RBP13.45□□□□□ -0.26
DHFR-201ENST00000439211 PLP1P60201 277 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 TBC1D26Q86UD7 250 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 FAM89BQ8N5H3 189 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 FBLL1A6NHQ2 334 aaKnown RBP13.45□□□□□ -0.26
DHFR-201ENST00000439211 C1QTNF9P0C862 333 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 LIFP15018 202 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 GPM6AP51674 278 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 PLP2Q04941 152 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 OR10V1Q8NGI7 309 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 OR10G9Q8NGN4 311 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 OR10G7Q8NGN6 311 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 OR1N2Q8NGR9 330 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 C5orf49A4QMS7 147 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 VASH2Q86V25 355 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 GATAD1Q8WUU5 269 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 ZNF318Q5VUA4 2279 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 ETV2O00321 342 aaPredicted RBP13.45□□□□□ -0.26
DHFR-201ENST00000439211 PTGDSP41222 190 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 FUT6P51993 359 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 PLGLB1Q02325 96 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms