RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 C2orf73Q8N5S3 287 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 DNAJB3Q8WWF6 145 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 EBNA1BP2Q99848 306 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 HIGD2AQ9BW72 106 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 PSMD13Q9UNM6 376 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 TIAM2Q8IVF5 1701 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 ATAD5Q96QE3 1844 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 TRPM6Q9BX84 2022 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 CCDC144AA2RUR9 1427 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 ZFYVE9O95405 1425 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 RIMS2Q9UQ26 1411 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 CEP152O94986 1710 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 IGKV1-12A0A0C4DH73 117 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 F5H5T6 163 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 ATP8B1O43520 1251 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 LTAP01374 205 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 IGKV1D-12P01611 117 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 PSKH1P11801 424 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 CRABP1P29762 137 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 CLDN12P56749 244 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 GTF2BQ00403 316 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 DNAL1Q4LDG9 190 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 C10orf91Q5T1B1 145 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 NOXRED1Q6NXP6 359 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 NIT1Q86X76 327 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 MSRB3Q8IXL7 192 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 DDI1Q8WTU0 396 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 GALMQ96C23 342 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 SMIM12Q96EX1 92 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 RBP7Q96R05 134 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 TMEM208Q9BTX3 173 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 METTL9Q9H1A3 318 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 ZNF286AQ9HBT8 521 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 NOSIPQ9Y314 301 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 LINC00588Q9Y4M8 146 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 CCDC18Q5T9S5 1454 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 LAMB2P55268 1798 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 RBBP6Q7Z6E9 1792 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 REV3LO60673 3130 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 SBF1O95248 1867 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 USP34Q70CQ2 3546 aa1.72□□□□□ -2.13
TRAPPC13-204ENST00000438419 KIAA1107Q9UPP5 1409 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 EIF2AK4Q9P2K8 1649 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 ITSN1Q15811 1721 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 KNDC1Q76NI1 1749 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 KIAA1551Q9HCM1 1747 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 CFAP46Q8IYW2 2715 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 NLRC5Q86WI3 1866 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 SCN11AQ9UI33 1791 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 A0A1B0GU33 70 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 DAPL1A0PJW8 107 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 E7EQL1 145 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 M0QYV0 167 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 LECT2O14960 151 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 SLC31A1O15431 190 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 COCHO43405 550 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 PSCAO43653 123 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 SOX14O95416 240 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 OPN1SWP03999 348 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 CTSEP14091 401 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 ORM2P19652 201 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 RPL14P50914 215 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 EMP2P54851 167 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 C1DQ13901 141 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 CST6Q15828 149 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 MAPK14Q16539 360 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 C4orf26Q17RF5 130 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 TRMT12Q53H54 448 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 PYCR3Q53H96 274 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 DRAM2Q6UX65 266 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 VN1R4Q7Z5H5 301 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 Q8NAQ8 132 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 OR5K1Q8NHB7 308 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 STOML3Q8TAV4 291 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 LMX1AQ8TE12 382 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 TAMM41Q96BW9 452 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 DRC3Q9H069 523 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 CARHSP1Q9Y2V2 147 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 WASHC3Q9Y3C0 194 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 OR51B4Q9Y5P0 310 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 HELZ2Q9BYK8 2649 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 ARFGEF1Q9Y6D6 1849 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 CLTCL1P53675 1640 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 TRPM1Q7Z4N2 1603 aa1.71□□□□□ -2.14
TRAPPC13-204ENST00000438419 HECTD1Q9ULT8 2610 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 MYO9AB2RTY4 2548 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 COL18A1P39060 1754 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 QRICH2Q9H0J4 1663 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 ARHGEF10O15013 1369 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 MTUS2Q5JR59 1369 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 COL5A1P20908 1838 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 IGLV10-54A0A075B6I4 117 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 IGHV3OR15-7A0A075B7D8 119 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 METTL15A6NJ78 407 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 GOLGA8KD6RF30 607 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 GOLGA8MH3BSY2 632 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 CCRL2O00421 344 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 SLC25A20O43772 301 aa1.7□□□□□ -2.14
TRAPPC13-204ENST00000438419 ARL6IP5O75915 188 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms