RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CD69Q07108 199 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 SAPCD1Q5SSQ6 148 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 FAM27BQ5VT28 67 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 OR51G1Q8NGK1 321 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 CLDND2Q8NHS1 167 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 C8orf46Q8TAG6 207 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 DNAJC4Q9NNZ3 241 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 G6PC2Q9NQR9 355 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 ASIPP42127 132 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 EWSR1Q01844 656 aaKnown RBP eCLIP9.68□□□□□ -0.86
SCN4A-201ENST00000435607 TRBV7-9A0A0J9YWB2 115 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 C9JCJ5 164 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 FAM216AQ8WUB2 273 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 FUT9Q9Y231 359 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 KIAA1217Q5T5P2 1943 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 ANKRD20A5PA0PJZ0 165 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 PSCAO43653 123 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 ZIC1Q15915 447 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 ST6GALNAC2Q9UJ37 374 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 VN1R4Q7Z5H5 301 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 RCC2Q9P258 522 aaKnown RBP9.68□□□□□ -0.86
SCN4A-201ENST00000435607 MRM2Q9UI43 246 aaKnown RBP9.68□□□□□ -0.86
SCN4A-201ENST00000435607 KCNE5Q9UJ90 142 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 SCMH1Q96GD3 660 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 SPOCK3Q9BQ16 436 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 PRSS22Q9GZN4 317 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 A0A1W2PRX2 142 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 NKX2-6A6NCS4 301 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 ZNF729A6NN14 1252 aaPredicted RBP9.68□□□□□ -0.86
SCN4A-201ENST00000435607 ATP5IP56385 69 aaPredicted RBP9.68□□□□□ -0.86
SCN4A-201ENST00000435607 MYEOVQ96EZ4 313 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 TMEM74BQ9NUR3 256 aa9.68□□□□□ -0.86
SCN4A-201ENST00000435607 K7ERU9 68 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 ZNF385CQ66K41 422 aaPredicted RBP9.67□□□□□ -0.86
SCN4A-201ENST00000435607 Q6ZNX1 250 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 OR10AG1Q8NH19 301 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 C7orf69Q9H7B7 122 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 IGHV3OR16-10A0A075B7F0 116 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 ODAMA1E959 279 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 CTDSPLO15194 276 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 CEACAM1P13688 526 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 PAX1P15863 534 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 C1QL3Q5VWW1 255 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 H1FOOQ8IZA3 346 aaPredicted RBP9.67□□□□□ -0.86
SCN4A-201ENST00000435607 PNKDQ8N490 385 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 CACNA1GO43497 2377 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 MED19A0JLT2 244 aaPredicted RBP9.67□□□□□ -0.86
SCN4A-201ENST00000435607 DIRC3C9JPN6 131 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 C12orf54Q6X4T0 127 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 OR1K1Q8NGR3 316 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 SEMA5BQ9P283 1151 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 DSPPQ9NZW4 1301 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 TRAV8-7A0A075B6U6 113 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 PLPPR5Q32ZL2 321 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 DEFB121Q5J5C9 76 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 HSF4Q9ULV5 492 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 SCN1AP35498 2009 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 FBLL1A6NHQ2 334 aaKnown RBP9.67□□□□□ -0.86
SCN4A-201ENST00000435607 CYB5R3P00387 301 aaPredicted RBP9.67□□□□□ -0.86
SCN4A-201ENST00000435607 MBNL2Q5VZF2 373 aaKnown RBP9.67□□□□□ -0.86
SCN4A-201ENST00000435607 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 MRPS18BQ9Y676 258 aaKnown RBP9.67□□□□□ -0.86
SCN4A-201ENST00000435607 CASP8AP2Q9UKL3 1982 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 H0Y980 276 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 SPINK2P20155 84 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 PTGDSP41222 190 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 ST3GAL2Q16842 350 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 ZNF880Q6PDB4 577 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 SMDT1Q9H4I9 107 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 RALGAPA1Q6GYQ0 2036 aa9.67□□□□□ -0.86
SCN4A-201ENST00000435607 HEATR1Q9H583 2144 aaKnown RBP9.66□□□□□ -0.86
SCN4A-201ENST00000435607 RND2P52198 227 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 RNF133Q8WVZ7 376 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 RGP1Q92546 391 aaPredicted RBP9.66□□□□□ -0.86
SCN4A-201ENST00000435607 RHOVQ96L33 236 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 SDF2L1Q9HCN8 221 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 C1QAP02745 245 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 FAM3BP58499 235 aaPredicted RBP9.66□□□□□ -0.86
SCN4A-201ENST00000435607 C10orf126Q8N4M7 172 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 OR13A1Q8NGR1 328 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 CD81P60033 236 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 TMEM177Q53S58 311 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 PLCH1Q4KWH8 1693 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 TRAV39A0A0B4J263 110 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 TCRBV4S1A1TA0A5B7 111 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 HLA-DQA1P01909 254 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 CSRP2Q16527 193 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 RTN4RL2Q86UN3 420 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 VN1R17PQ8TDU5 208 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 MZB1Q8WU39 189 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 TLNRD1Q9H1K6 362 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 TJP1Q07157 1748 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 ZP4Q12836 540 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 DTX1Q86Y01 620 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 C10orf111Q8N326 155 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 TMEFF2Q9UIK5 374 aaPredicted RBP9.66□□□□□ -0.86
SCN4A-201ENST00000435607 NEU3Q9UQ49 428 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 SIGLEC1Q9BZZ2 1709 aa9.66□□□□□ -0.86
SCN4A-201ENST00000435607 OR2H2O95918 312 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 PGLYRP4Q96LB8 373 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms