RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 ZNF221Q9UK13 617 aa11.64□□□□□ -0.55
RPUSD3-208ENST00000433972 KMT2CQ8NEZ4 4911 aaKnown RBP11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 TMEM235A6NFC5 223 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 ZNF736B4DX44 427 aaPredicted RBP11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 BET1O15155 118 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 GSTT2P0CG29 244 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 GSTT2BP0CG30 244 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 ECI1P42126 302 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 CBX5P45973 191 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 LUMP51884 338 aaPredicted RBP11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 F2RL1P55085 397 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 TMEM69Q5SWH9 247 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 OR11H1Q8NG94 326 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 SLC25A38Q96DW6 304 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 AUNIPQ9H7T9 357 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 RDH8Q9NYR8 311 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 VSIG4Q9Y279 399 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 RBM7Q9Y580 266 aaKnown RBP11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 U3KQK5 164 aa11.63□□□□□ -0.55
RPUSD3-208ENST00000433972 ST8SIA5O15466 376 aa11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 HLA-DRB1P01911 266 aa11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 APOA1P02647 267 aa11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 ACTBP60709 375 aa11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 RUNX1Q01196 453 aa11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 ZNF616Q08AN1 781 aa11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 FAM71F2Q6NXP2 309 aa11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 NUDCD2Q8WVJ2 157 aa11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 C11orf54Q9H0W9 315 aaPredicted RBP11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 OR1A1Q9P1Q5 309 aa11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 ZNF256Q9Y2P7 627 aaPredicted RBP11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 LSM4Q9Y4Z0 139 aaKnown RBP11.62□□□□□ -0.55
RPUSD3-208ENST00000433972 TRBV6-7A0A0A0MS04 114 aa11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 NBR2O15453 112 aa11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 CNIH2Q6PI25 160 aa11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 TCTEX1D1Q8N7M0 179 aa11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 MYOZ3Q8TDC0 251 aa11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 MAFIPQ8WZ33 124 aa11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 CABLES2Q9BTV7 478 aa11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 TOLLIPQ9H0E2 274 aa11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 OR51J1Q9H342 316 aa11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 PARP11Q9NR21 331 aa11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 ELF5Q9UKW6 265 aaPredicted RBP11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 DNAH9Q9NYC9 4486 aa11.61□□□□□ -0.55
RPUSD3-208ENST00000433972 COL7A1Q02388 2944 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 SAA2-SAA4A0A096LPE2 208 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 TRAV41A0A0B4J266 112 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 IGKV1-6A0A0C4DH72 117 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 FAM25AB3EWG3 89 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 FAM25CB3EWG5 89 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 FAM25GB3EWG6 89 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 SAA2P0DJI9 122 aaPredicted RBP11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 PPIFP30405 207 aaKnown RBP11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 MC5RP33032 325 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 ARPC4P59998 168 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 C5orf64Q2M2E5 130 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 IGSF11Q5DX21 431 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 LIN54Q6MZP7 749 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 ZNF833PQ6ZTB9 187 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 ZNF429Q86V71 674 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 OR1N2Q8NGR9 330 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 PRR25Q96S07 402 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 NABP2Q9BQ15 211 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 MRPL20Q9BYC9 149 aaKnown RBP11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 IFI27L2Q9H2X8 130 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 ANXA10Q9UJ72 324 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 RNF150Q9ULK6 438 aa11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 MRPS7Q9Y2R9 242 aaKnown RBP11.6□□□□□ -0.55
RPUSD3-208ENST00000433972 CCDC160A6NGH7 325 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 ATP6V0E1O15342 81 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 LY86O95711 162 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 IGLV1-40P01703 118 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 OR8U9P0C7N5 309 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 PRSS3P35030 304 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 OR3A3P47888 321 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 PYHIN1Q6K0P9 492 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 HOGA1Q86XE5 327 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 ODF3L1Q8IXM7 274 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 ZNF491Q8N8L2 437 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 BEST4Q8NFU0 473 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 NPBQ8NG41 125 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 C15orf40Q8WUR7 153 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 ABHD14BQ96IU4 210 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 AGMATQ9BSE5 352 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 IFT46Q9NQC8 304 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 ADAM30Q9UKF2 790 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 WSB1Q9Y6I7 421 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 SMAD5-AS1Q9Y6J3 95 aa11.59□□□□□ -0.55
RPUSD3-208ENST00000433972 IGHV7-81A0A0B4J1V7 117 aa11.58□□□□□ -0.56
RPUSD3-208ENST00000433972 OR5H14A6NHG9 310 aa11.58□□□□□ -0.56
RPUSD3-208ENST00000433972 I3L521 148 aa11.58□□□□□ -0.56
RPUSD3-208ENST00000433972 SSX5O60225 188 aa11.58□□□□□ -0.56
RPUSD3-208ENST00000433972 SLC22A5O76082 557 aa11.58□□□□□ -0.56
RPUSD3-208ENST00000433972 NDUFA3O95167 84 aa11.58□□□□□ -0.56
RPUSD3-208ENST00000433972 CD40LGP29965 261 aa11.58□□□□□ -0.56
RPUSD3-208ENST00000433972 RAB9AP51151 201 aa11.58□□□□□ -0.56
RPUSD3-208ENST00000433972 TAS2R20P59543 309 aa11.58□□□□□ -0.56
RPUSD3-208ENST00000433972 TMEM267Q0VDI3 215 aaPredicted RBP11.58□□□□□ -0.56
RPUSD3-208ENST00000433972 PLGLAQ15195 96 aa11.58□□□□□ -0.56
RPUSD3-208ENST00000433972 ZNF660Q6AZW8 331 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms