RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 TCTEX1D2Q8WW35 142 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 RPEQ96AT9 228 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 TRAV40A0A0B4J280 105 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 GAPDHP04406 335 aaKnown RBP21.44■■□□□ 1.02
TMEM248-205ENST00000433271 REG1BP48304 166 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 GPR157Q5UAW9 335 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 TCTEX1D1Q8N7M0 179 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 CASTOR1Q8WTX7 329 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 GLYATL2Q8WU03 294 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 MITD1Q8WV92 249 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 OR51J1Q9H342 316 aa21.44■■□□□ 1.02
TMEM248-205ENST00000433271 NPFFO15130 113 aa21.43■■□□□ 1.02
TMEM248-205ENST00000433271 TXNL1O43396 289 aa21.43■■□□□ 1.02
TMEM248-205ENST00000433271 TPTE2P1Q5T6R2 138 aa21.43■■□□□ 1.02
TMEM248-205ENST00000433271 LHFPL4Q7Z7J7 247 aa21.43■■□□□ 1.02
TMEM248-205ENST00000433271 MRPL20Q9BYC9 149 aaKnown RBP21.43■■□□□ 1.02
TMEM248-205ENST00000433271 TMEM222Q9H0R3 208 aa21.43■■□□□ 1.02
TMEM248-205ENST00000433271 EPHA1P21709 976 aa21.42■■□□□ 1.02
TMEM248-205ENST00000433271 SAA4P35542 130 aa21.42■■□□□ 1.02
TMEM248-205ENST00000433271 ZNF816Q0VGE8 651 aaPredicted RBP21.42■■□□□ 1.02
TMEM248-205ENST00000433271 TMEM187Q14656 261 aa21.42■■□□□ 1.02
TMEM248-205ENST00000433271 ZNF383Q8NA42 475 aa21.42■■□□□ 1.02
TMEM248-205ENST00000433271 DDB2Q92466 427 aa21.42■■□□□ 1.02
TMEM248-205ENST00000433271 PRELID3BQ9Y3B1 194 aa21.42■■□□□ 1.02
TMEM248-205ENST00000433271 ACANP16112 2415 aa21.41■■□□□ 1.02
TMEM248-205ENST00000433271 IGHV4-38-2P0DP08 117 aa21.41■■□□□ 1.02
TMEM248-205ENST00000433271 SPNS3Q6ZMD2 512 aa21.41■■□□□ 1.02
TMEM248-205ENST00000433271 PIP4P2Q8N4L2 257 aa21.41■■□□□ 1.02
TMEM248-205ENST00000433271 C18orf12Q96KH6 178 aa21.41■■□□□ 1.02
TMEM248-205ENST00000433271 PHB2Q99623 299 aa21.41■■□□□ 1.02
TMEM248-205ENST00000433271 FAM212BQ9NTI7 297 aaPredicted RBP21.41■■□□□ 1.02
TMEM248-205ENST00000433271 ZNF469Q96JG9 3925 aaPredicted RBP21.4■■□□□ 1.02
TMEM248-205ENST00000433271 hCG_2014768A0A024R1R8 64 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 UCP1P25874 307 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 BRWD1-AS2P59051 145 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 KRTAP1-1Q07627 177 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 ANKRD55Q3KP44 614 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 KLF17Q5JT82 389 aaPredicted RBP21.4■■□□□ 1.02
TMEM248-205ENST00000433271 SPAG16Q8N0X2 631 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 C12orf45Q8N5I9 185 aaPredicted RBP21.4■■□□□ 1.02
TMEM248-205ENST00000433271 CD300LFQ8TDQ1 290 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 MALSU1Q96EH3 234 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 NABP2Q9BQ15 211 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 A0A0B4J2A0 478 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 VGLL3A8MV65 326 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 OOSP1A8MZH6 123 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 CD5LO43866 347 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 SERPINE2P07093 398 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 TAGLNQ01995 201 aaKnown RBP21.4■■□□□ 1.02
TMEM248-205ENST00000433271 LIAT1Q6ZQX7 453 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 OR5AN1Q8NGI8 311 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 COQ8AQ8NI60 647 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 AJUBAQ96IF1 538 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 SHPKQ9UHJ6 478 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 HILPDAQ9Y5L2 63 aa21.4■■□□□ 1.02
TMEM248-205ENST00000433271 IGHV3OR16-10A0A075B7F0 116 aa21.39■■□□□ 1.01
TMEM248-205ENST00000433271 IGHV1-3A0A0C4DH29 117 aa21.39■■□□□ 1.01
TMEM248-205ENST00000433271 SSNA1O43805 119 aa21.39■■□□□ 1.01
TMEM248-205ENST00000433271 KIR2DS2P43631 304 aa21.39■■□□□ 1.01
TMEM248-205ENST00000433271 SRPXP78539 464 aa21.39■■□□□ 1.01
TMEM248-205ENST00000433271 ZNF585BQ52M93 769 aa21.39■■□□□ 1.01
TMEM248-205ENST00000433271 OR2B11Q5JQS5 317 aa21.39■■□□□ 1.01
TMEM248-205ENST00000433271 CCDC144NLQ6NUI1 221 aa21.39■■□□□ 1.01
TMEM248-205ENST00000433271 PRR13Q9NZ81 148 aa21.39■■□□□ 1.01
TMEM248-205ENST00000433271 TLN2Q9Y4G6 2542 aa21.39■■□□□ 1.01
TMEM248-205ENST00000433271 RBFOX2O43251 390 aaKnown RBP eCLIP21.38■■□□□ 1.011e-5■■■■□ 19.7
TMEM248-205ENST00000433271 RAMP3O60896 148 aa21.38■■□□□ 1.01
TMEM248-205ENST00000433271 CDS2O95674 445 aa21.38■■□□□ 1.01
TMEM248-205ENST00000433271 SSX2Q16385 188 aa21.38■■□□□ 1.01
TMEM248-205ENST00000433271 RUSC1-AS1Q66K80 236 aa21.38■■□□□ 1.01
TMEM248-205ENST00000433271 CADM3Q8N126 398 aa21.38■■□□□ 1.01
TMEM248-205ENST00000433271 OR8H3Q8N146 312 aa21.38■■□□□ 1.01
TMEM248-205ENST00000433271 C17orf50Q8WW18 174 aa21.38■■□□□ 1.01
TMEM248-205ENST00000433271 TMEM56Q96MV1 263 aa21.38■■□□□ 1.01
TMEM248-205ENST00000433271 TMEM56-RWDD3S4R434 201 aa21.38■■□□□ 1.01
TMEM248-205ENST00000433271 H0YJW9 148 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 FCGR3BO75015 233 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 BPIFB3P59826 476 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 BRD3OSQ6XYD6 125 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 LGI3Q8N145 548 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 LRTM2Q8N967 370 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 UXS1Q8NBZ7 420 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 NANPQ8TBE9 248 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 CELSR1Q9NYQ6 3014 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 A0A1W2PPI3 338 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 RPA2P15927 270 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 LIN54Q6MZP7 749 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 MED28Q9H204 178 aa21.37■■□□□ 1.01
TMEM248-205ENST00000433271 A8MV72 311 aaPredicted RBP21.36■■□□□ 1.01
TMEM248-205ENST00000433271 APOA2P02652 100 aa21.36■■□□□ 1.01
TMEM248-205ENST00000433271 RRASP10301 218 aa21.36■■□□□ 1.01
TMEM248-205ENST00000433271 MC5RP33032 325 aa21.36■■□□□ 1.01
TMEM248-205ENST00000433271 RTL8BQ17RB0 113 aa21.36■■□□□ 1.01
TMEM248-205ENST00000433271 MOB3BQ86TA1 216 aa21.36■■□□□ 1.01
TMEM248-205ENST00000433271 DYNAPQ8N1N2 210 aa21.36■■□□□ 1.01
TMEM248-205ENST00000433271 LHFPL5Q8TAF8 219 aa21.36■■□□□ 1.01
TMEM248-205ENST00000433271 IL22RA2Q969J5 263 aa21.36■■□□□ 1.01
TMEM248-205ENST00000433271 SLC35D1Q9NTN3 355 aa21.36■■□□□ 1.01
TMEM248-205ENST00000433271 PIGBOS1A0A0B4J2F0 54 aa21.35■■□□□ 1.01
TMEM248-205ENST00000433271 FSHBP01225 129 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms