RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 COA4Q9NYJ1 87 aa16.61■□□□□ 0.25
PTPRA-207ENST00000431048 EXOSC1Q9Y3B2 195 aaKnown RBP16.61■□□□□ 0.25
PTPRA-207ENST00000431048 RYR1P21817 5038 aa16.6■□□□□ 0.25
PTPRA-207ENST00000431048 IRGMA1A4Y4 181 aa16.6■□□□□ 0.25
PTPRA-207ENST00000431048 BMPR1BO00238 502 aa16.6■□□□□ 0.25
PTPRA-207ENST00000431048 RPS27AP62979 156 aaKnown RBP16.6■□□□□ 0.25
PTPRA-207ENST00000431048 DEFA5Q01523 94 aa16.6■□□□□ 0.25
PTPRA-207ENST00000431048 ZNF485Q8NCK3 441 aa16.6■□□□□ 0.25
PTPRA-207ENST00000431048 PYDC1Q8WXC3 89 aa16.6■□□□□ 0.25
PTPRA-207ENST00000431048 DERL3Q96Q80 235 aa16.6■□□□□ 0.25
PTPRA-207ENST00000431048 CHMP1AQ9HD42 196 aaPredicted RBP16.6■□□□□ 0.25
PTPRA-207ENST00000431048 TECRQ9NZ01 308 aaKnown RBP16.6■□□□□ 0.25
PTPRA-207ENST00000431048 OR1A1Q9P1Q5 309 aa16.6■□□□□ 0.25
PTPRA-207ENST00000431048 ZNF221Q9UK13 617 aa16.6■□□□□ 0.25
PTPRA-207ENST00000431048 DIMT1Q9UNQ2 313 aaKnown RBP16.6■□□□□ 0.25
PTPRA-207ENST00000431048 CXorf65A6NEN9 183 aa16.59■□□□□ 0.25
PTPRA-207ENST00000431048 WBP4O75554 376 aaKnown RBP16.59■□□□□ 0.25
PTPRA-207ENST00000431048 SMN1Q16637 294 aaKnown RBP16.59■□□□□ 0.25
PTPRA-207ENST00000431048 CEMP1Q6PRD7 247 aaPredicted RBP16.59■□□□□ 0.25
PTPRA-207ENST00000431048 ADAD2Q8NCV1 583 aaKnown RBP16.59■□□□□ 0.25
PTPRA-207ENST00000431048 DYNLRB2Q8TF09 96 aa16.59■□□□□ 0.25
PTPRA-207ENST00000431048 TM2D1Q9BX74 207 aa16.59■□□□□ 0.25
PTPRA-207ENST00000431048 SLC35D1Q9NTN3 355 aa16.59■□□□□ 0.25
PTPRA-207ENST00000431048 CLEC2DQ9UHP7 191 aa16.59■□□□□ 0.25
PTPRA-207ENST00000431048 MGAT4AQ9UM21 535 aa16.59■□□□□ 0.25
PTPRA-207ENST00000431048 MYL12AP19105 171 aa16.58■□□□□ 0.24
PTPRA-207ENST00000431048 HTR2CP28335 458 aa16.58■□□□□ 0.24
PTPRA-207ENST00000431048 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.58■□□□□ 0.24
PTPRA-207ENST00000431048 SETD6Q8TBK2 473 aa16.58■□□□□ 0.24
PTPRA-207ENST00000431048 KCTD12Q96CX2 325 aaKnown RBP16.58■□□□□ 0.24
PTPRA-207ENST00000431048 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.57■□□□□ 0.24
PTPRA-207ENST00000431048 FAM223BA6NKX1 122 aa16.57■□□□□ 0.24
PTPRA-207ENST00000431048 OR9G9P0C7N8 305 aa16.57■□□□□ 0.24
PTPRA-207ENST00000431048 GUCA2BQ16661 112 aa16.57■□□□□ 0.24
PTPRA-207ENST00000431048 MRGPRG-AS1Q2M3A8 158 aa16.57■□□□□ 0.24
PTPRA-207ENST00000431048 WFDC3Q8IUB2 231 aa16.57■□□□□ 0.24
PTPRA-207ENST00000431048 FAM223AQ8IWN6 122 aa16.57■□□□□ 0.24
PTPRA-207ENST00000431048 ZFP41Q8N8Y5 198 aa16.57■□□□□ 0.24
PTPRA-207ENST00000431048 THRSPQ92748 146 aa16.57■□□□□ 0.24
PTPRA-207ENST00000431048 GGTLC1Q9BX51 225 aa16.57■□□□□ 0.24
PTPRA-207ENST00000431048 ZNF230Q9UIE0 474 aaPredicted RBP16.57■□□□□ 0.24
PTPRA-207ENST00000431048 TRBV9A0A0B4J1U6 114 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 MSGN1A6NI15 193 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 C2orf70A6NJV1 201 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 DYNC1I1O14576 645 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 CIB2O75838 187 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 ATP5HO75947 161 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 CD1AP06126 327 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 FOLR2P14207 255 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 HLA-DRB3P79483 266 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 ATP5G2Q06055 141 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 PMS2P11Q13670 270 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 FAM209BQ5JX69 171 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 OR10K2Q6IF99 312 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 SLC16A13Q7RTY0 426 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 KCNG3Q8TAE7 436 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 TMEM59Q9BXS4 323 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 AKIP1Q9NQ31 210 aa16.56■□□□□ 0.24
PTPRA-207ENST00000431048 KIAA1109Q2LD37 5005 aa16.55■□□□□ 0.24
PTPRA-207ENST00000431048 M0R1X1 148 aa16.55■□□□□ 0.24
PTPRA-207ENST00000431048 ATF4P18848 351 aaPredicted RBP16.55■□□□□ 0.24
PTPRA-207ENST00000431048 TAS2R43P59537 309 aa16.55■□□□□ 0.24
PTPRA-207ENST00000431048 RHOGP84095 191 aa16.55■□□□□ 0.24
PTPRA-207ENST00000431048 TAGLNQ01995 201 aaKnown RBP16.55■□□□□ 0.24
PTPRA-207ENST00000431048 TNFRSF9Q07011 255 aa16.55■□□□□ 0.24
PTPRA-207ENST00000431048 MED21Q13503 144 aa16.55■□□□□ 0.24
PTPRA-207ENST00000431048 EXOSC2Q13868 293 aaKnown RBP16.55■□□□□ 0.24
PTPRA-207ENST00000431048 TMEM177Q53S58 311 aa16.55■□□□□ 0.24
PTPRA-207ENST00000431048 RPP25LQ8N5L8 163 aaKnown RBP16.55■□□□□ 0.24
PTPRA-207ENST00000431048 WDR89Q96FK6 387 aaPredicted RBP16.55■□□□□ 0.24
PTPRA-207ENST00000431048 PHB2Q99623 299 aa16.55■□□□□ 0.24
PTPRA-207ENST00000431048 C9orf16Q9BUW7 83 aa16.55■□□□□ 0.24
PTPRA-207ENST00000431048 PLEKHJ1Q9NW61 149 aa16.55■□□□□ 0.24
PTPRA-207ENST00000431048 KLK5Q9Y337 293 aaPredicted RBP16.55■□□□□ 0.24
PTPRA-207ENST00000431048 LOC102724200A0A096LPH7 203 aaPredicted RBP16.54■□□□□ 0.24
PTPRA-207ENST00000431048 LGALS9O00182 355 aa16.54■□□□□ 0.24
PTPRA-207ENST00000431048 NDUFB8O95169 186 aa16.54■□□□□ 0.24
PTPRA-207ENST00000431048 SCTP09683 121 aa16.54■□□□□ 0.24
PTPRA-207ENST00000431048 C1orf100Q5SVJ3 147 aa16.54■□□□□ 0.24
PTPRA-207ENST00000431048 ZFP1Q6P2D0 407 aa16.54■□□□□ 0.24
PTPRA-207ENST00000431048 TMEM80Q96HE8 168 aa16.54■□□□□ 0.24
PTPRA-207ENST00000431048 HARBI1Q96MB7 349 aa16.54■□□□□ 0.24
PTPRA-207ENST00000431048 NICN1Q9BSH3 213 aa16.54■□□□□ 0.24
PTPRA-207ENST00000431048 Q9N2K0 584 aa16.54■□□□□ 0.24
PTPRA-207ENST00000431048 DMRT1Q9Y5R6 373 aa16.54■□□□□ 0.24
PTPRA-207ENST00000431048 SRRM4A7MD48 611 aaKnown RBP16.53■□□□□ 0.24
PTPRA-207ENST00000431048 TUSC2O75896 110 aa16.53■□□□□ 0.24
PTPRA-207ENST00000431048 MAPK3P27361 379 aaPredicted RBP16.53■□□□□ 0.24
PTPRA-207ENST00000431048 TEX45Q8NA69 505 aa16.53■□□□□ 0.24
PTPRA-207ENST00000431048 AK3Q9UIJ7 227 aa16.53■□□□□ 0.24
PTPRA-207ENST00000431048 TP53TG1Q9Y2A0 90 aa16.53■□□□□ 0.24
PTPRA-207ENST00000431048 VPS13DQ5THJ4 4388 aa16.53■□□□□ 0.24
PTPRA-207ENST00000431048 TMEM14DPA8MWL7 114 aa16.52■□□□□ 0.24
PTPRA-207ENST00000431048 APELAP0DMC3 54 aa16.52■□□□□ 0.24
PTPRA-207ENST00000431048 QRFPP83859 136 aa16.52■□□□□ 0.24
PTPRA-207ENST00000431048 ZNF45Q02386 682 aa16.52■□□□□ 0.24
PTPRA-207ENST00000431048 UNC119Q13432 240 aa16.52■□□□□ 0.24
PTPRA-207ENST00000431048 PRSS8Q16651 343 aa16.52■□□□□ 0.24
PTPRA-207ENST00000431048 HDHD3Q9BSH5 251 aaPredicted RBP16.52■□□□□ 0.24
PTPRA-207ENST00000431048 RDH8Q9NYR8 311 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms