RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 EHFQ9NZC4 300 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 ARHGEF5Q12774 1597 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 KIF1BO60333 1816 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 NHSL1Q5SYE7 1610 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 NDUFB4O95168 129 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 CSN3P07498 182 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 MEOX1P50221 254 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 FOXG1P55316 489 aaPredicted RBP4.55□□□□□ -1.68
PTPN4-203ENST00000430976 PARM1Q6UWI2 310 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 TMEM86BQ8N661 226 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 OR5H2Q8NGV7 314 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 MRPL24Q96A35 216 aaKnown RBP4.55□□□□□ -1.68
PTPN4-203ENST00000430976 DDIT4LQ96D03 193 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 DERL3Q96Q80 235 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 KIR2DL4Q99706 377 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 RPUSD1Q9UJJ7 312 aaKnown RBP4.55□□□□□ -1.68
PTPN4-203ENST00000430976 MED31Q9Y3C7 131 aa4.55□□□□□ -1.68
PTPN4-203ENST00000430976 SLIT1O75093 1534 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 IGLC7A0M8Q6 106 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 FAM90A10PA6NDY2 464 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 NEURL1BA8MQ27 555 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 OOSP1A8MZH6 123 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 FXYD1O00168 92 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 C1QTNF9P0C862 333 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 CRYBB2P43320 205 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 H2BFSP57053 126 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 ELOCQ15369 112 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 PMS2CLQ68D20 193 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 OR10G2Q8NGC3 310 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 OR1L1Q8NH94 360 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 SNRNP40Q96DI7 357 aaKnown RBP4.54□□□□□ -1.68
PTPN4-203ENST00000430976 LINC00597Q9H2U6 94 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 WDR83OSQ9Y284 106 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 EDC4Q6P2E9 1401 aaKnown RBP4.54□□□□□ -1.68
PTPN4-203ENST00000430976 A0A0B4J2E0 115 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 A0A1B0GX12 115 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 PSG2P11465 335 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 CLDN6P56747 220 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 FBXW4P57775 412 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 HERVK_113P61574 105 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF791Q3KP31 576 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-203ENST00000430976 SLC25A35Q3KQZ1 300 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 SFXN4Q6P4A7 337 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 FAM90A1Q86YD7 464 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 OR4X2Q8NGF9 303 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 DDB2Q92466 427 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 SPIN2AQ99865 258 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 SPIN2BQ9BPZ2 258 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 KLK5Q9Y337 293 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-203ENST00000430976 ARHGAP23Q9P227 1491 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 PHLPP1O60346 1717 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 NSG1A0A0A6YYJ2 146 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 hADV38S2A0JD32 116 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 DPRXA6NFQ7 191 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 C3orf70A6NLC5 250 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-203ENST00000430976 C9JQL5 133 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 GPANK1O95872 356 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF708P17019 499 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 EMDP50402 254 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 LHX2P50458 406 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 C2orf68Q2NKX9 166 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 ARSIQ5FYB1 569 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 C1QL3Q5VWW1 255 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 Q6ZT83 130 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-203ENST00000430976 C1orf174Q8IYL3 243 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 TTC9CQ8N5M4 171 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 TPRX1Q8N7U7 411 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF587Q96SQ5 575 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-203ENST00000430976 SPATA25Q9BR10 227 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 MTFP1Q9UDX5 166 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 KLF12Q9Y4X4 402 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 SMCHD1A6NHR9 2005 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 PTPRFP10586 1907 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 TRAV8-2A0A0B4J237 113 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 SMIM35A0A1B0GVV1 85 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 A8MWV9 139 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 F8VVB4 439 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 F8VWA3 439 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 MGST3O14880 152 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 GPX1P07203 203 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 GPX3P22352 226 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 FCER1GP30273 86 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 ECSCRQ19T08 205 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 DMKNQ6E0U4 476 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-203ENST00000430976 LCN12Q6JVE5 192 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF417Q8TAU3 575 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 NUS1Q96E22 293 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 LINC01587Q99440 93 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 TMEM222Q9H0R3 208 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 TMEM30AQ9NV96 361 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 KLHDC2Q9Y2U9 406 aa4.54□□□□□ -1.68
PTPN4-203ENST00000430976 LRP5O75197 1615 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 SMIM22K7EJ46 135 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 FAM157BP0CG42 384 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 CTSEP14091 401 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 CRISP2P16562 243 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 TMEM256Q8N2U0 113 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 OR5AK2Q8NH90 309 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 PPP1R1CQ8WVI7 109 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms