RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 WNK1Q9H4A3 2382 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 LINC00473A8K010 186 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 J3QRK9 145 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 M0QYG6 137 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 M0R1X1 148 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 TBPP20226 339 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
USP40-205ENST00000430158 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 BLCAPP62952 87 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 AADACL3Q5VUY0 350 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 Q6ZS46 218 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 C16orf82Q7Z2V1 217 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 LHFPL1Q86WI0 220 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 ZNF645Q8N7E2 425 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 C16orf95Q9H693 158 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 ZNF702PQ9H963 129 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 CCL28Q9NRJ3 127 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 MMP24Q9Y5R2 645 aa9.89□□□□□ -0.83
USP40-205ENST00000430158 ANKRD20A5PA0PJZ0 165 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 OR5H14A6NHG9 310 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 RNF212BA8MTL3 300 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 MOSP00540 346 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 GNRHRP30968 328 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 F2RL1P55085 397 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 RPL30P62888 115 aaKnown RBP9.88□□□□□ -0.83
USP40-205ENST00000430158 HNF4GQ14541 408 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 ACTBL2Q562R1 376 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 C11orf88Q6PI97 169 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 LINC00299Q6ZSB3 139 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 OR2T10Q8NGZ9 312 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 MRGPRFQ96AM1 343 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 ZNF2Q9BSG1 426 aaPredicted RBP9.88□□□□□ -0.83
USP40-205ENST00000430158 SLC25A33Q9BSK2 321 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 THAP7Q9BT49 309 aaPredicted RBP9.88□□□□□ -0.83
USP40-205ENST00000430158 FXYD6Q9H0Q3 95 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 RANBP3Q9H6Z4 567 aaPredicted RBP9.88□□□□□ -0.83
USP40-205ENST00000430158 RAB18Q9NP72 206 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 AKIP1Q9NQ31 210 aa9.88□□□□□ -0.83
USP40-205ENST00000430158 SLC22A5O76082 557 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 IGKV1-16P04430 117 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 TMEM11P17152 192 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 MC5RP33032 325 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 TAS2R19P59542 299 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 KLF9Q13886 244 aaPredicted RBP9.87□□□□□ -0.83
USP40-205ENST00000430158 SPANXN2Q5MJ10 180 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 DHRS7BQ6IAN0 325 aaPredicted RBP9.87□□□□□ -0.83
USP40-205ENST00000430158 STEAP1BQ6NZ63 245 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 ZNF818PQ6ZRF7 136 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 FAM71E2Q8N5Q1 922 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 C5orf56Q8N8D9 126 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 Q8N9W7 124 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 NPBQ8NG41 125 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 OR6F1Q8NGZ6 308 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 LINC01006Q8NI28 216 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 PTTG2Q9NZH5 202 aa9.87□□□□□ -0.83
USP40-205ENST00000430158 FGF16O43320 207 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 NDUFA3O95167 84 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 CSF1P09603 554 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 CNTFRP26992 372 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 RAG2P55895 527 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 UCP3P55916 312 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 FXYD4P59646 89 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 BAK1Q16611 211 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 PYDC2Q56P42 97 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 RNASE10Q5GAN6 216 aaKnown RBP9.86□□□□□ -0.83
USP40-205ENST00000430158 Q8N402 240 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 ARRDC1Q8N5I2 433 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 ZBTB34Q8NCN2 500 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 BVESQ8NE79 360 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 OR4C16Q8NGL9 310 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 WIPF2Q8TF74 440 aaPredicted RBP9.86□□□□□ -0.83
USP40-205ENST00000430158 SECTM1Q8WVN6 248 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 ADTRPQ96IZ2 230 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 GPHA2Q96T91 129 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 RNF5Q99942 180 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 NPFFR1Q9GZQ6 430 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 SLC5A7Q9GZV3 580 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 SIGLEC9Q9Y336 463 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 MOB4Q9Y3A3 225 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 WASHC3Q9Y3C0 194 aa9.86□□□□□ -0.83
USP40-205ENST00000430158 RBM7Q9Y580 266 aaKnown RBP9.86□□□□□ -0.83
USP40-205ENST00000430158 SH2D7A6NKC9 451 aaPredicted RBP9.85□□□□□ -0.83
USP40-205ENST00000430158 SRRM4A7MD48 611 aaKnown RBP9.85□□□□□ -0.83
USP40-205ENST00000430158 RAB3DO95716 219 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 IGLV2-23P01705 113 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 CRYBA1P05813 215 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 MDKP21741 143 aaPredicted RBP9.85□□□□□ -0.83
USP40-205ENST00000430158 THBS3P49746 956 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 PROK1P58294 105 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 ZNF45Q02386 682 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 HES1Q14469 280 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 TMEM177Q53S58 311 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 AWAT1Q58HT5 328 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 FAAP20Q6NZ36 180 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 PDPNQ86YL7 162 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 LINC00528Q8N1L1 170 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 GDPD1Q8N9F7 314 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 OR8H1Q8NGG4 311 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 AKR1E2Q96JD6 320 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 HSD17B10Q99714 261 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms