RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SLC25A17O43808 307 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 BRI3O95415 125 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 LGALS7P47929 136 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 VEGFCP49767 419 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 TMEM50BP56557 158 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 CBX3Q13185 183 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 TPBGQ13641 420 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 IRF3Q14653 427 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 P2RY14Q15391 338 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 SRSF7Q16629 238 aaKnown RBP eCLIP11.43□□□□□ -0.582e-7■■■■□ 24.5
MSH5-208ENST00000429846 ANKRD13BQ86YJ7 626 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 OR4A4PQ8NGN8 299 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 TMEM203Q969S6 136 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 ARHGAP5-AS1Q96IT6 56 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 CITED4Q96RK1 184 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 GFI1Q99684 422 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 TM2D3Q9BRN9 247 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 ZNF355PQ9NSJ1 428 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 SLC35D1Q9NTN3 355 aa11.43□□□□□ -0.58
MSH5-208ENST00000429846 IGKV1-6A0A0C4DH72 117 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 M0R1X1 148 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 LDLRAD4O15165 306 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 IGHV4-30-4P0DP06 118 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 LYL1P12980 280 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 PSMD7P51665 324 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 MRPS15P82914 257 aaKnown RBP11.42□□□□□ -0.58
MSH5-208ENST00000429846 TAGLNQ01995 201 aaKnown RBP11.42□□□□□ -0.58
MSH5-208ENST00000429846 TMEM91Q6ZNR0 172 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 SGPP2Q8IWX5 399 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 CABLES2Q9BTV7 478 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 RSRP1Q9BUV0 290 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 PALMDQ9NP74 551 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 TPRKBQ9Y3C4 175 aa11.42□□□□□ -0.58
MSH5-208ENST00000429846 AK6Q9Y3D8 172 aaKnown RBP11.42□□□□□ -0.58
MSH5-208ENST00000429846 FABP7O15540 132 aa11.41□□□□□ -0.58
MSH5-208ENST00000429846 CNIH1O95406 144 aa11.41□□□□□ -0.58
MSH5-208ENST00000429846 HSMCR30P0CW71 290 aa11.41□□□□□ -0.58
MSH5-208ENST00000429846 AADACP22760 399 aa11.41□□□□□ -0.58
MSH5-208ENST00000429846 RPS25P62851 125 aaKnown RBP11.41□□□□□ -0.58
MSH5-208ENST00000429846 MLLT11Q13015 90 aaPredicted RBP11.41□□□□□ -0.58
MSH5-208ENST00000429846 PLAC9Q5JTB6 97 aa11.41□□□□□ -0.58
MSH5-208ENST00000429846 FAM3DQ96BQ1 224 aa11.41□□□□□ -0.58
MSH5-208ENST00000429846 HARBI1Q96MB7 349 aa11.41□□□□□ -0.58
MSH5-208ENST00000429846 CENPOQ9BU64 300 aa11.41□□□□□ -0.58
MSH5-208ENST00000429846 OR2D2Q9H210 308 aa11.41□□□□□ -0.58
MSH5-208ENST00000429846 H0Y980 276 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 DENRO43583 198 aaKnown RBP11.4□□□□□ -0.58
MSH5-208ENST00000429846 IGLV2-23P01705 113 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 CD3GP09693 182 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 CALRP27797 417 aaKnown RBP11.4□□□□□ -0.58
MSH5-208ENST00000429846 LINC00205P59089 165 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 SSBP2P81877 361 aaPredicted RBP11.4□□□□□ -0.58
MSH5-208ENST00000429846 KLF5Q13887 457 aaPredicted RBP11.4□□□□□ -0.58
MSH5-208ENST00000429846 RTL8BQ17RB0 113 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 Q8N1Y9 231 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 OR9G4Q8NGQ1 327 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 OR10J5Q8NHC4 309 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 USMG5Q96IX5 58 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 ACOT13Q9NPJ3 140 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 C19orf73Q9NVV2 129 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 V9GY05 133 aa11.4□□□□□ -0.58
MSH5-208ENST00000429846 BET1O15155 118 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 RGS10O43665 173 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 CRYGBP07316 175 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 FCGR3AP08637 254 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 RRASP10301 218 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 SNRPBP14678 240 aaKnown RBP11.39□□□□□ -0.59
MSH5-208ENST00000429846 CLDN12P56749 244 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 C2orf76Q3KRA6 126 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 TMEM177Q53S58 311 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 HAPLN4Q86UW8 402 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 OR5T1Q8NG75 326 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 ISOC1Q96CN7 298 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 RAB3CQ96E17 227 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 TINAGL1Q9GZM7 467 aaPredicted RBP11.39□□□□□ -0.59
MSH5-208ENST00000429846 DUSP21Q9H596 190 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 SDHAF2Q9NX18 166 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 RAB22AQ9UL26 194 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 DNAH7Q8WXX0 4024 aa11.39□□□□□ -0.59
MSH5-208ENST00000429846 TRBV6-7A0A0A0MS04 114 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 TMEM272A0A1B0GTI8 110 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 ANKRD34BA5PLL1 514 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 SHOXO15266 292 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 GADD45AP24522 165 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 PJVKQ0ZLH3 352 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 TATDN3Q17R31 274 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 LCN12Q6JVE5 192 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 ZNF343Q6P1L6 599 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 ADTRPQ96IZ2 230 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 SPATA25Q9BR10 227 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 SIGLEC8Q9NYZ4 499 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 PEF1Q9UBV8 284 aaKnown RBP11.38□□□□□ -0.59
MSH5-208ENST00000429846 KCNK7Q9Y2U2 307 aa11.38□□□□□ -0.59
MSH5-208ENST00000429846 HUWE1Q7Z6Z7 4374 aaKnown RBP11.38□□□□□ -0.59
MSH5-208ENST00000429846 OR2A4O95047 310 aa11.37□□□□□ -0.59
MSH5-208ENST00000429846 SYNJ2BPP57105 145 aa11.37□□□□□ -0.59
MSH5-208ENST00000429846 FABP5Q01469 135 aa11.37□□□□□ -0.59
MSH5-208ENST00000429846 VMA21Q3ZAQ7 101 aa11.37□□□□□ -0.59
MSH5-208ENST00000429846 IGSF11Q5DX21 431 aa11.37□□□□□ -0.59
MSH5-208ENST00000429846 PRSS48Q7RTY5 328 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms