RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 IGSF10Q6WRI0 2623 aa6.86□□□□□ -1.31
HPS4-205ENST00000429411 FBLL1A6NHQ2 334 aaKnown RBP6.85□□□□□ -1.31
HPS4-205ENST00000429411 K7N7A8 449 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 ARR3P36575 388 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 HERPUD1Q15011 391 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 TBC1D28Q2M2D7 210 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 ZNF383Q8NA42 475 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 C1orf162Q8NEQ5 155 aaPredicted RBP6.85□□□□□ -1.31
HPS4-205ENST00000429411 Q8WTZ3 238 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 SEBOXQ9HB31 216 aaPredicted RBP6.85□□□□□ -1.31
HPS4-205ENST00000429411 SEPSECSQ9HD40 501 aaKnown RBP6.85□□□□□ -1.31
HPS4-205ENST00000429411 KIAA1456Q9P272 454 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 MAP1AP78559 2803 aaPredicted RBP6.85□□□□□ -1.31
HPS4-205ENST00000429411 LOC102723996A0A087X1L8 192 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 H7BYZ3 331 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 ETV2O00321 342 aaPredicted RBP6.85□□□□□ -1.31
HPS4-205ENST00000429411 ZNF737O75373 536 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 CA11O75493 328 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 CRYAAP02489 173 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 CELA3BP08861 270 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 CXCL1P09341 107 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 FGF7P21781 194 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 LINC00205P59089 165 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 NCR3LG1Q68D85 454 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 ERASQ7Z444 233 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 OR4D5Q8NGN0 318 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 ABHD14BQ96IU4 210 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 TRIB1Q96RU8 372 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 GFOD1Q9NXC2 390 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 TREM2Q9NZC2 230 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 PLCE1Q9P212 2302 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 A0A1W2PPV4 95 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 ZNF503-AS2A6NEH8 195 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 FOXI3A8MTJ6 420 aaPredicted RBP6.85□□□□□ -1.31
HPS4-205ENST00000429411 KIAA1324LA8MWY0 1029 aaPredicted RBP6.85□□□□□ -1.31
HPS4-205ENST00000429411 TM4SF5O14894 197 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 WNT9BO14905 357 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 CD55P08174 381 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 PGA5P0DJD9 388 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 TAS2R30P59541 319 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 LBHQ53QV2 105 aaPredicted RBP6.85□□□□□ -1.31
HPS4-205ENST00000429411 H2BFWTQ7Z2G1 175 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 DEFB108BQ8NET1 73 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 OR52L2PQ8NGH6 319 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 SSC4DQ8WTU2 575 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 OR4C12Q96R67 309 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 FOXJ2Q9P0K8 574 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 PSG11Q9UQ72 335 aa6.85□□□□□ -1.31
HPS4-205ENST00000429411 C5orf52A6NGY3 159 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 OR5H1A6NKK0 313 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 SH2D1BO14796 132 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 OR2H2O95918 312 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 SRP19P09132 144 aaKnown RBP6.84□□□□□ -1.31
HPS4-205ENST00000429411 OR8U8P0C7N1 319 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 PSMB3P49720 205 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 B3GALT5-AS1P59052 145 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 OR8B8Q15620 311 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 SPNS3Q6ZMD2 512 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 OR5A2Q8NGI9 324 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 OR1L1Q8NH94 360 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 C22orf15Q8WYQ4 148 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 HEYLQ9NQ87 328 aaPredicted RBP6.84□□□□□ -1.31
HPS4-205ENST00000429411 LIN7CQ9NUP9 197 aaKnown RBP6.84□□□□□ -1.31
HPS4-205ENST00000429411 IGKV1-6A0A0C4DH72 117 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 LRP5LA4QPB2 252 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 KLRC4-KLRK1H3BQV0 150 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 CLDN34H7C241 214 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 RTP5Q14D33 572 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 MSMO1Q15800 293 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 RIPPLY2Q5TAB7 128 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 Q6ZRM9 215 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 OR10P1Q8NGE3 313 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 RAB40CQ96S21 281 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 NEU1Q99519 415 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 TAAR3PQ9P1P4 343 aa6.84□□□□□ -1.31
HPS4-205ENST00000429411 PPP5D1E7EU14 171 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 ARL3P36405 182 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 ERVFRD-1P60508 538 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 HIST1H3AP68431 136 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 LY6DQ14210 128 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 FFAR4Q5NUL3 377 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 DCAF10Q5QP82 559 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 C10orf91Q5T1B1 145 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 ZNF66Q6ZN08 573 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 MRPL41Q8IXM3 137 aaKnown RBP6.84□□□□□ -1.32
HPS4-205ENST00000429411 SLC25A40Q8TBP6 338 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 CACNG8Q8WXS5 425 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 GALMQ96C23 342 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 ZNF479Q96JC4 524 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 TECTBQ96PL2 329 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 GGACTQ9BVM4 153 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 C1QTNF5Q9BXJ0 243 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 RBKSQ9H477 322 aa6.84□□□□□ -1.32
HPS4-205ENST00000429411 TRGV5A0A0B4J1U4 118 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 MMP7P09237 267 aaPredicted RBP6.83□□□□□ -1.32
HPS4-205ENST00000429411 MDH2P40926 338 aaKnown RBP6.83□□□□□ -1.32
HPS4-205ENST00000429411 UCP3P55916 312 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 PPP1CBP62140 327 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 CATR1Q13166 79 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 SCGB2A2Q13296 93 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms