RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 METRNQ9UJH8 293 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 WISP2O76076 250 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 TMEM256Q8N2U0 113 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 TTTY12Q9BZ98 90 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 NAT8Q9UHE5 227 aa10.52□□□□□ -0.73
CDH3-202ENST00000429102 A6NNC1 897 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 FCGR3BO75015 233 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 GZMBP10144 247 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 LMO1P25800 156 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 RIPPLY2Q5TAB7 128 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 ABLIM2Q6H8Q1 611 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 TOMM20LQ6UXN7 152 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 DTD1Q8TEA8 209 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 B4GALT7Q9UBV7 327 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 PAM16Q9Y3D7 125 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 A0A087WWC5 75 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 LRP5LA4QPB2 252 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 UBE2NP61088 152 aaKnown RBP10.51□□□□□ -0.73
CDH3-202ENST00000429102 TNFRSF9Q07011 255 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 WDR86Q86TI4 376 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 SLC25A40Q8TBP6 338 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 PCED1AQ9H1Q7 454 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 LIN7CQ9NUP9 197 aaKnown RBP10.51□□□□□ -0.73
CDH3-202ENST00000429102 ZNF391Q9UJN7 358 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 PITPNC1Q9UKF7 332 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 BDP1A6H8Y1 2624 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 OR2T10Q8NGZ9 312 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 SAMD10Q9BYL1 202 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 HEYLQ9NQ87 328 aaPredicted RBP10.51□□□□□ -0.73
CDH3-202ENST00000429102 FOXJ2Q9P0K8 574 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 GNG12Q9UBI6 72 aa10.51□□□□□ -0.73
CDH3-202ENST00000429102 TACC2O95359 2948 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 NEURL1O76050 574 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 IGLV2-14P01704 120 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 LHX2P50458 406 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 GFRA1P56159 465 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 PMS2CLQ68D20 193 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 REC114Q7Z4M0 266 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 GCM1Q9NP62 436 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 KALRNO60229 2985 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 LAMTOR5O43504 91 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 PRB4P10163 310 aaPredicted RBP10.5□□□□□ -0.73
CDH3-202ENST00000429102 ABHD12Q8N2K0 398 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 GALMQ96C23 342 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 FAM122AQ96E09 287 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 SMDT1Q9H4I9 107 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 SH2D2AQ9NP31 389 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 IGHV3OR15-7A0A075B7D8 119 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 C12orf77C9JDV5 145 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 SLC17A3O00476 420 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 EREGO14944 169 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 SELLP14151 372 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 KDF1Q8NAX2 398 aaPredicted RBP10.5□□□□□ -0.73
CDH3-202ENST00000429102 ZNF114Q8NC26 417 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 DEFB108BQ8NET1 73 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 IER2Q9BTL4 223 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 TRAPPC1Q9Y5R8 145 aa10.5□□□□□ -0.73
CDH3-202ENST00000429102 CACNA1BQ00975 2339 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 SH2D1BO14796 132 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 SLC31A2O15432 143 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 HBZP02008 142 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 CLDN18P56856 261 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 DDA1Q9BW61 102 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 NUPR1O60356 82 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 HAND1O96004 215 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 TCL1AP56279 114 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 PNRC1Q12796 327 aaPredicted RBP10.49□□□□□ -0.73
CDH3-202ENST00000429102 SGMS2Q8NHU3 365 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 SPSB4Q96A44 273 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 RTL8AQ9BWD3 113 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 ACTR3CQ9C0K3 210 aaPredicted RBP10.49□□□□□ -0.73
CDH3-202ENST00000429102 COL4A2P08572 1712 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 CEP192Q8TEP8 1941 aa10.49□□□□□ -0.73
CDH3-202ENST00000429102 A0A1B0GW64 132 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 MYOD1P15172 320 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 COX5AP20674 150 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 MEOX1P50221 254 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 NUBP1P53384 320 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 PPP1CBP62140 327 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 KIAA1644Q3SXP7 199 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 PDLIM3Q53GG5 364 aaPredicted RBP10.48□□□□□ -0.73
CDH3-202ENST00000429102 FAM201AQ5SY85 155 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 HES3Q5TGS1 186 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 MIC13Q5XKP0 118 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 QTRT1Q9BXR0 403 aaKnown RBP10.48□□□□□ -0.73
CDH3-202ENST00000429102 SERTAD4Q9NUC0 356 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 ELOA3CA0A087WX78 387 aaPredicted RBP10.48□□□□□ -0.73
CDH3-202ENST00000429102 KBTBD11O94819 623 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 MPV17P39210 176 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 CDC34P49427 236 aaPredicted RBP10.48□□□□□ -0.73
CDH3-202ENST00000429102 BAGE3Q86Y29 109 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 BAGE2Q86Y30 109 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 TMEM183AQ8IXX5 376 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 ZNF703Q9H7S9 590 aaPredicted RBP10.48□□□□□ -0.73
CDH3-202ENST00000429102 ACACAQ13085 2346 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 SPENQ96T58 3664 aaKnown RBP10.48□□□□□ -0.73
CDH3-202ENST00000429102 FRMD6-AS1P0C7T7 363 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 PAX5Q02548 391 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 PRAMEF5Q5TYX0 476 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 DHRS13Q6UX07 377 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms