RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ISOC1Q96CN7 298 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 TMED9Q9BVK6 235 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 RETNQ9HD89 108 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 PLECQ15149 4684 aaKnown RBP12.62□□□□□ -0.39
VARS-216ENST00000428445 IZUMO1RA6ND01 250 aa12.62□□□□□ -0.39
VARS-216ENST00000428445 SPDEFO95238 335 aa12.62□□□□□ -0.39
VARS-216ENST00000428445 TFAP2AP05549 437 aa12.62□□□□□ -0.39
VARS-216ENST00000428445 APELAP0DMC3 54 aa12.62□□□□□ -0.39
VARS-216ENST00000428445 SYNJ2BPP57105 145 aa12.62□□□□□ -0.39
VARS-216ENST00000428445 KLF5Q13887 457 aaPredicted RBP12.62□□□□□ -0.39
VARS-216ENST00000428445 P2RY14Q15391 338 aa12.62□□□□□ -0.39
VARS-216ENST00000428445 OGFRL1Q5TC84 451 aaPredicted RBP12.62□□□□□ -0.39
VARS-216ENST00000428445 CEACAM19Q7Z692 300 aa12.62□□□□□ -0.39
VARS-216ENST00000428445 TSNAXQ99598 290 aaKnown RBP12.62□□□□□ -0.39
VARS-216ENST00000428445 VCXQ9H320 206 aa12.62□□□□□ -0.39
VARS-216ENST00000428445 RANGRFQ9HD47 186 aaPredicted RBP12.62□□□□□ -0.39
VARS-216ENST00000428445 IGKV1-6A0A0C4DH72 117 aa12.61□□□□□ -0.39
VARS-216ENST00000428445 C13orf42A0A1B0GVH6 325 aa12.61□□□□□ -0.39
VARS-216ENST00000428445 A8MZ25 164 aa12.61□□□□□ -0.39
VARS-216ENST00000428445 H3BUA1 57 aa12.61□□□□□ -0.39
VARS-216ENST00000428445 RBMXL2O75526 392 aaKnown RBP12.61□□□□□ -0.39
VARS-216ENST00000428445 CD3GP09693 182 aa12.61□□□□□ -0.39
VARS-216ENST00000428445 HLA-DRB3P79483 266 aa12.61□□□□□ -0.39
VARS-216ENST00000428445 TRAM1Q15629 374 aa12.61□□□□□ -0.39
VARS-216ENST00000428445 POC5Q8NA72 575 aa12.61□□□□□ -0.39
VARS-216ENST00000428445 TMEM68Q96MH6 324 aa12.61□□□□□ -0.39
VARS-216ENST00000428445 LPAR5Q9H1C0 372 aa12.61□□□□□ -0.39
VARS-216ENST00000428445 SCN3BQ9NY72 215 aa12.61□□□□□ -0.39
VARS-216ENST00000428445 CNIH1O95406 144 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 BRI3O95415 125 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 IGLV2-23P01705 113 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 PSMD7P51665 324 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 TMEM50BP56557 158 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 TAGLNQ01995 201 aaKnown RBP12.6□□□□□ -0.39
VARS-216ENST00000428445 RCN1Q15293 331 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 MOGAT2Q3SYC2 334 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.6□□□□□ -0.39
VARS-216ENST00000428445 OR9G4Q8NGQ1 327 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 GFI1Q99684 422 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 CENPOQ9BU64 300 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 Q9N2K0 584 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 ZNF221Q9UK13 617 aa12.6□□□□□ -0.39
VARS-216ENST00000428445 LSM2Q9Y333 95 aaKnown RBP12.6□□□□□ -0.39
VARS-216ENST00000428445 A0A0G2JLM5 398 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 PTGES3LE9PB15 166 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 M0R1X1 148 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 SLC17A2O00624 439 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 ARL6IP5O75915 188 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 CSN3P07498 182 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 ZP3P21754 424 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 PSMA1P25786 263 aaKnown RBP12.59□□□□□ -0.39
VARS-216ENST00000428445 LGALS7P47929 136 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 SERPINB10P48595 397 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 VEGFCP49767 419 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 DYRK1AQ13627 763 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 PDPNQ86YL7 162 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 UFD1Q92890 307 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 FAM110AQ9BQ89 295 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 SPATA25Q9BR10 227 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 THAP7Q9BT49 309 aaPredicted RBP12.59□□□□□ -0.39
VARS-216ENST00000428445 C12orf4Q9NQ89 552 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 SLC35D1Q9NTN3 355 aa12.59□□□□□ -0.39
VARS-216ENST00000428445 SRRM4A7MD48 611 aaKnown RBP12.58□□□□□ -0.4
VARS-216ENST00000428445 FOXI3A8MTJ6 420 aaPredicted RBP12.58□□□□□ -0.4
VARS-216ENST00000428445 DIRAS3O95661 229 aa12.58□□□□□ -0.4
VARS-216ENST00000428445 CRYGBP07316 175 aa12.58□□□□□ -0.4
VARS-216ENST00000428445 PLA2G7Q13093 441 aa12.58□□□□□ -0.4
VARS-216ENST00000428445 TPBGQ13641 420 aa12.58□□□□□ -0.4
VARS-216ENST00000428445 MED22Q15528 200 aa12.58□□□□□ -0.4
VARS-216ENST00000428445 TMEM203Q969S6 136 aa12.58□□□□□ -0.4
VARS-216ENST00000428445 ARHGAP5-AS1Q96IT6 56 aa12.58□□□□□ -0.4
VARS-216ENST00000428445 TUBA4BQ9H853 241 aa12.58□□□□□ -0.4
VARS-216ENST00000428445 PLGRKTQ9HBL7 147 aa12.58□□□□□ -0.4
VARS-216ENST00000428445 RDH8Q9NYR8 311 aa12.58□□□□□ -0.4
VARS-216ENST00000428445 TRDCB7Z8K6 153 aa12.57□□□□□ -0.4
VARS-216ENST00000428445 APOA2P02652 100 aa12.57□□□□□ -0.4
VARS-216ENST00000428445 CLDN12P56749 244 aa12.57□□□□□ -0.4
VARS-216ENST00000428445 IRF3Q14653 427 aa12.57□□□□□ -0.4
VARS-216ENST00000428445 MRGPRG-AS1Q2M3A8 158 aa12.57□□□□□ -0.4
VARS-216ENST00000428445 OR56B1Q8NGI3 324 aa12.57□□□□□ -0.4
VARS-216ENST00000428445 C5orf30Q96GV9 206 aa12.57□□□□□ -0.4
VARS-216ENST00000428445 CMSS1Q9BQ75 279 aaKnown RBP12.57□□□□□ -0.4
VARS-216ENST00000428445 PECRQ9BY49 303 aa12.57□□□□□ -0.4
VARS-216ENST00000428445 PEF1Q9UBV8 284 aaKnown RBP12.57□□□□□ -0.4
VARS-216ENST00000428445 TPRKBQ9Y3C4 175 aa12.57□□□□□ -0.4
VARS-216ENST00000428445 AK6Q9Y3D8 172 aaKnown RBP12.57□□□□□ -0.4
VARS-216ENST00000428445 SELENOKQ9Y6D0 94 aa12.57□□□□□ -0.4
VARS-216ENST00000428445 H0Y980 276 aa12.56□□□□□ -0.4
VARS-216ENST00000428445 PRH1P02810 166 aa12.56□□□□□ -0.4
VARS-216ENST00000428445 EDN2P20800 178 aa12.56□□□□□ -0.4
VARS-216ENST00000428445 PLAC9Q5JTB6 97 aa12.56□□□□□ -0.4
VARS-216ENST00000428445 LIPKQ5VXJ0 399 aa12.56□□□□□ -0.4
VARS-216ENST00000428445 BVESQ8NE79 360 aa12.56□□□□□ -0.4
VARS-216ENST00000428445 OR4A4PQ8NGN8 299 aa12.56□□□□□ -0.4
VARS-216ENST00000428445 TINAGL1Q9GZM7 467 aaPredicted RBP12.56□□□□□ -0.4
VARS-216ENST00000428445 PLEKHA3Q9HB20 300 aa12.56□□□□□ -0.4
VARS-216ENST00000428445 SDHAF2Q9NX18 166 aa12.56□□□□□ -0.4
VARS-216ENST00000428445 COA4Q9NYJ1 87 aa12.56□□□□□ -0.4
VARS-216ENST00000428445 ALMS1Q8TCU4 4167 aa12.55□□□□□ -0.4
VARS-216ENST00000428445 MSGN1A6NI15 193 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms