RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 IFNA2P01563 188 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 HLA-AP01891 365 aaKnown RBP10.11□□□□□ -0.79
TRIM39-207ENST00000428404 GAPDHP04406 335 aaKnown RBP10.11□□□□□ -0.79
TRIM39-207ENST00000428404 IGHV4-38-2P0DP08 117 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 ANKRD55Q3KP44 614 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 SP6Q3SY56 376 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 ZNF585BQ52M93 769 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 TPTE2P1Q5T6R2 138 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 LHFPL4Q7Z7J7 247 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 DRAXINQ8NBI3 349 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-207ENST00000428404 OR5AN1Q8NGI8 311 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 OR51H1Q8NH63 302 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 NABP2Q9BQ15 211 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 MRPL20Q9BYC9 149 aaKnown RBP10.11□□□□□ -0.79
TRIM39-207ENST00000428404 TMEM222Q9H0R3 208 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 OR51J1Q9H342 316 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 GPN1Q9HCN4 374 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-207ENST00000428404 SHPKQ9UHJ6 478 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 HIVEP1P15822 2718 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 A0A1W2PRD5 423 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 A0A1W2PRF3 423 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 A0A1W2PRM7 423 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 OOSP1A8MZH6 123 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 RBFOX2O43251 390 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRIM39-207ENST00000428404 CREBL2O60519 120 aaPredicted RBP10.1□□□□□ -0.79
TRIM39-207ENST00000428404 CDS2O95674 445 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 OR5AC1P0C628 307 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 VAMP1P23763 118 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 UCP1P25874 307 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 SAA4P35542 130 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 CEACAM3P40198 252 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 THBS3P49746 956 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 LGALS4P56470 323 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 BPIFB3P59826 476 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 CATR1Q13166 79 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 HABP2Q14520 560 aaPredicted RBP10.1□□□□□ -0.79
TRIM39-207ENST00000428404 SLC9A3R2Q15599 337 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 C11orf88Q6PI97 169 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 TGIF2LXQ8IUE1 241 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 DYNAPQ8N1N2 210 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 LRTM2Q8N967 370 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 C17orf50Q8WW18 174 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 TCTEX1D2Q8WW35 142 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 MALSU1Q96EH3 234 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 C18orf12Q96KH6 178 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 TMEM56Q96MV1 263 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 LIN7CQ9NUP9 197 aaKnown RBP10.1□□□□□ -0.79
TRIM39-207ENST00000428404 TMEM56-RWDD3S4R434 201 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 MXRA5Q9NR99 2828 aa10.1□□□□□ -0.79
TRIM39-207ENST00000428404 TRAV40A0A0B4J280 105 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 IGHV1-3A0A0C4DH29 117 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 A0A1W2PPI3 338 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 DBX1A6NMT0 343 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 TXNL1O43396 289 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 RAMP3O60896 148 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 EPHA1P21709 976 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 KIR2DS2P43631 304 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 REG1BP48304 166 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 TAGLNQ01995 201 aaKnown RBP10.09□□□□□ -0.79
TRIM39-207ENST00000428404 GPR157Q5UAW9 335 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 LIAT1Q6ZQX7 453 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 CADM3Q8N126 398 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 OR8H3Q8N146 312 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 C12orf45Q8N5I9 185 aaPredicted RBP10.09□□□□□ -0.79
TRIM39-207ENST00000428404 CD300LFQ8TDQ1 290 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 CASTOR1Q8WTX7 329 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 RPEQ96AT9 228 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 TMUB1Q9BVT8 246 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 PRELID3BQ9Y3B1 194 aa10.09□□□□□ -0.79
TRIM39-207ENST00000428404 IGHV3OR16-10A0A075B7F0 116 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 CYSRT1A8MQ03 144 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 H0YJW9 148 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 IGKV1-39P01597 117 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 IGKV1D-39P04432 117 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 ANXA3P12429 323 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 SRPXP78539 464 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 CBX3Q13185 183 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 SSX2Q16385 188 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 RUSC1-AS1Q66K80 236 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 SPAG16Q8N0X2 631 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 LHFPL5Q8TAF8 219 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 CHAC2Q8WUX2 184 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 IL22RA2Q969J5 263 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 PHB2Q99623 299 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 PRR13Q9NZ81 148 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 SVEP1Q4LDE5 3571 aa10.08□□□□□ -0.8
TRIM39-207ENST00000428404 FAM90A9PA6NNJ1 464 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 A8MV72 311 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-207ENST00000428404 FCGR3BO75015 233 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 SERPINE2P07093 398 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 RRASP10301 218 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 FOSL1P15407 271 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 RPA2P15927 270 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 HLA-GP17693 338 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 MC5RP33032 325 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 LPAR6P43657 344 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 C2orf68Q2NKX9 166 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 DHRS7BQ6IAN0 325 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-207ENST00000428404 CCDC144NLQ6NUI1 221 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 BRD3OSQ6XYD6 125 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms