RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 METTL1Q9UBP6 276 aaKnown RBP11.65□□□□□ -0.54
RTN4-210ENST00000427710 A3GALT2U3KPV4 340 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 IGKV1D-13A0A0B4J2D9 117 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 RBBP9O75884 186 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 DIRAS3O95661 229 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 IGF1P05019 195 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 IGKV1-13P0DP09 117 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 IGLL1P15814 213 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 ECSCRQ19T08 205 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 DEFB136Q30KP8 78 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 BEAN1Q3B7T3 259 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 CXorf66Q5JRM2 361 aaPredicted RBP11.64□□□□□ -0.55
RTN4-210ENST00000427710 UBE2NLQ5JXB2 153 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 CNIH2Q6PI25 160 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 ABHD5Q8WTS1 349 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 SLC25A46Q96AG3 418 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 FAM103A1Q9BTL3 118 aaKnown RBP11.64□□□□□ -0.55
RTN4-210ENST00000427710 COMMD3Q9UBI1 195 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 ANXA10Q9UJ72 324 aa11.64□□□□□ -0.55
RTN4-210ENST00000427710 LINC00473A8K010 186 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 SLC25A17O43808 307 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 CA2P00918 260 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 EIF4EP06730 217 aaKnown RBP11.63□□□□□ -0.55
RTN4-210ENST00000427710 CX3CL1P78423 397 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 FOXE3Q13461 319 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 GPR107Q5VW38 600 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 PDPNQ86YL7 162 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 CROCCP3Q8IVE0 287 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 COMMD1Q8N668 190 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 BEST4Q8NFU0 473 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 CASTOR1Q8WTX7 329 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 FLYWCH2Q96CP2 140 aaKnown RBP11.63□□□□□ -0.55
RTN4-210ENST00000427710 KLK15Q9H2R5 256 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 ZFP57Q9NU63 452 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 OR2W1Q9Y3N9 320 aa11.63□□□□□ -0.55
RTN4-210ENST00000427710 A0A0A6YYH2 397 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 TRAV41A0A0B4J266 112 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 A6NJ64 397 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 XRCC3O43542 346 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 IGLV2-23P01705 113 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 IGHG4P01861 327 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 HLA-DQB1P01920 261 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 CTXN2P0C2S0 81 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 EGR2P11161 476 aaPredicted RBP11.62□□□□□ -0.55
RTN4-210ENST00000427710 PPIFP30405 207 aaKnown RBP11.62□□□□□ -0.55
RTN4-210ENST00000427710 DUTP33316 252 aaKnown RBP11.62□□□□□ -0.55
RTN4-210ENST00000427710 THBS3P49746 956 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 LUMP51884 338 aaPredicted RBP11.62□□□□□ -0.55
RTN4-210ENST00000427710 TAS2R20P59543 309 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 ARPC4P59998 168 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 PDLIM3Q53GG5 364 aaPredicted RBP11.62□□□□□ -0.55
RTN4-210ENST00000427710 OR2B11Q5JQS5 317 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 HOGA1Q86XE5 327 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 ANKRD13BQ86YJ7 626 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 ZNF695Q8IW36 515 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 S100A16Q96FQ6 103 aaKnown RBP11.62□□□□□ -0.55
RTN4-210ENST00000427710 GPHA2Q96T91 129 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 TSNAXQ99598 290 aaKnown RBP11.62□□□□□ -0.55
RTN4-210ENST00000427710 GON7Q9BXV9 100 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 MRPS26Q9BYN8 205 aaKnown RBP11.62□□□□□ -0.55
RTN4-210ENST00000427710 TGP01266 2768 aa11.62□□□□□ -0.55
RTN4-210ENST00000427710 A0A1W2PN81 502 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 SRRM4A7MD48 611 aaKnown RBP11.61□□□□□ -0.55
RTN4-210ENST00000427710 ARPC1BO15143 372 aaKnown RBP11.61□□□□□ -0.55
RTN4-210ENST00000427710 SHOXO15266 292 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 TUSC2O75896 110 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 ELANEP08246 267 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 AADACP22760 399 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 PSMB8P28062 276 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 CHRNA7P36544 502 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 GNB1P62873 340 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 RPL30P62888 115 aaKnown RBP11.61□□□□□ -0.55
RTN4-210ENST00000427710 PJVKQ0ZLH3 352 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 CTF1Q16619 201 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 TMEM69Q5SWH9 247 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 ZNF660Q6AZW8 331 aaPredicted RBP11.61□□□□□ -0.55
RTN4-210ENST00000427710 MRPL41Q8IXM3 137 aaKnown RBP11.61□□□□□ -0.55
RTN4-210ENST00000427710 ZNF645Q8N7E2 425 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 LINC00482Q8N8I6 264 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 DDB2Q92466 427 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 SNAPC3Q92966 411 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 RAX2Q96IS3 184 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 HARBI1Q96MB7 349 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 OR5B12Q96R08 314 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 RNF5Q99942 180 aa11.61□□□□□ -0.55
RTN4-210ENST00000427710 SOX15O60248 233 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 HPGDSO60760 199 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 TMEM127O75204 238 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 CRYZL1O95825 349 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 IGLV2-14P01704 120 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 FCGR2CP31995 323 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 ALDH3B2P48448 385 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 RAB25P57735 213 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 C19orf54Q5BKX5 351 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 PPP1R27Q86WC6 154 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 RNF152Q8N8N0 203 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 WFDC9Q8NEX5 89 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 GRPEL2Q8TAA5 225 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 SECTM1Q8WVN6 248 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 GNB4Q9HAV0 340 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms