RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 AMMECR1Q9Y4X0 333 aaPredicted RBP6.74□□□□□ -1.33
SMARCAL1-206ENST00000427645 INSIG2Q9Y5U4 225 aa6.74□□□□□ -1.33
SMARCAL1-206ENST00000427645 IGHV2-26A0A0B4J1V2 119 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 TRAV20A0A0B4J274 112 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 A0A0B4J293 547 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 FAM157AC9JC47 383 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 H0Y980 276 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 ST8SIA5O15466 376 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 PFDN1O60925 122 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 ATG12O94817 140 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 TOX4O94842 621 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 MSMBP08118 114 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 RPA2P15927 270 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 HLA-GP17693 338 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 THBS3P49746 956 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 GZMKP49863 264 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 GNG10P50151 68 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 SUPT4H1P63272 117 aaKnown RBP6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 PAX8Q06710 450 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 LGI3Q8N145 548 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 Q8N7P7 452 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 LRTM2Q8N967 370 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 LINC01356Q8N9X3 169 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 CD300LFQ8TDQ1 290 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 ABHD14BQ96IU4 210 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 SEC22CQ9BRL7 303 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 PARP12Q9H0J9 701 aaKnown RBP6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 LIN7CQ9NUP9 197 aaKnown RBP6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 PRELID3BQ9Y3B1 194 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 MALRD1Q5VYJ5 2156 aa6.73□□□□□ -1.33
SMARCAL1-206ENST00000427645 DUXBA0A1W2PPF3 345 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 TXNL1O43396 289 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 CDS2O95674 445 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 IFNA21P01568 189 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 IGLV1-47P01700 117 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 IGHV3-7P01780 117 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 SERPINE2P07093 398 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 RRASP10301 218 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 EPHA1P21709 976 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 CEACAM3P40198 252 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 KIR2DS2P43631 304 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 ZNF137PP52743 207 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 LGALS4P56470 323 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 EIF4EBP1Q13541 118 aaPredicted RBP6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 TMEM187Q14656 261 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 FAM120AOSQ5T036 256 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 DCAF12L2Q5VW00 463 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 ZNF833PQ6ZTB9 187 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 VMO1Q7Z5L0 202 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 ZNF695Q8IW36 515 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 ODF3L1Q8IXM7 274 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 UXS1Q8NBZ7 420 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 OR52B4Q8NGK2 314 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 CASTOR1Q8WTX7 329 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 GLYATL2Q8WU03 294 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 ASB13Q8WXK3 278 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 LEAP2Q969E1 77 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 IL22RA2Q969J5 263 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 PPP1R14BQ96C90 147 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 MSI2Q96DH6 328 aaKnown RBP6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 TMEM56Q96MV1 263 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 AIFM2Q9BRQ8 373 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 TMEM222Q9H0R3 208 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 SIRPDQ9H106 197 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 IFI27L2Q9H2X8 130 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 LPAR2Q9HBW0 351 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 RAB18Q9NP72 206 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 MMP26Q9NRE1 261 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 TMEM56-RWDD3S4R434 201 aa6.72□□□□□ -1.33
SMARCAL1-206ENST00000427645 SAA2-SAA4A0A096LPE2 208 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 A0A1W2PPE3 182 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 DBX1A6NMT0 343 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 LEUTXA8MZ59 168 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 OOSP1A8MZH6 123 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 BUB1B-PAK6H3BSN5 160 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 J3QLI3 93 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 M0R1X1 148 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 SLC31A2O15432 143 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 RBFOX2O43251 390 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 TNFSF12O43508 249 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 GAPDHP04406 335 aaKnown RBP6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 ARG1P05089 322 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 OR5AC1P0C628 307 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 SAA2P0DJI9 122 aaPredicted RBP6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 SULT1A3P0DMM9 295 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 SULT1A4P0DMN0 295 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 MMP9P14780 707 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 SRD5A1P18405 259 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 UCP1P25874 307 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 HTR1DP28221 377 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 MC5RP33032 325 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 DUTP33316 252 aaKnown RBP6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 UBE2E1P51965 193 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 CYCSP99999 105 aaKnown RBP6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 SLC9A3R2Q15599 337 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 HLA-DRB5Q30154 266 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 SP6Q3SY56 376 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 MINOS1Q5TGZ0 78 aa6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 FAM53AQ6NSI3 398 aaPredicted RBP6.71□□□□□ -1.34
SMARCAL1-206ENST00000427645 PNKDQ8N490 385 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms