RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 THAP6Q8TBB0 222 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 PLPPR1Q8TBJ4 325 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 MRPL30Q8TCC3 161 aaKnown RBP4.39□□□□□ -1.71
C9orf3-205ENST00000427193 C15orf40Q8WUR7 153 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 ZFAND2BQ8WV99 257 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 DEDD2Q8WXF8 326 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 S100ZQ8WXG8 99 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 DYRK2Q92630 601 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 CORO2AQ92828 525 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 S100A13Q99584 98 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 FAAP24Q9BTP7 215 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 CCDC32Q9BV29 185 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 TOLLIPQ9H0E2 274 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 ATG5Q9H1Y0 275 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 DIABLOQ9NR28 239 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 MTFP1Q9UDX5 166 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 WNK2Q9Y3S1 2297 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 TENM3Q9P273 2699 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 IGHV3OR15-7A0A075B7D8 119 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 IGKV1D-8A0A087WSZ0 117 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 hCG_1807616A0A1W2PRN6 198 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 ANKRD20A5PA0PJZ0 165 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 TMEM235A6NFC5 223 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 C15orf65H3BRN8 121 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 SH2D1BO14796 132 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 DEGS1O15121 323 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 PLA2G10O15496 165 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 RGS5O15539 181 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 ORC5O43913 435 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 IGHV2-5P01817 119 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 S100A5P33763 92 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 CEBPDP49716 269 aaPredicted RBP4.38□□□□□ -1.71
C9orf3-205ENST00000427193 PITPNAQ00169 270 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 SPANXN2Q5MJ10 180 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF660Q6AZW8 331 aaPredicted RBP4.38□□□□□ -1.71
C9orf3-205ENST00000427193 CCBE1Q6UXH8 406 aaPredicted RBP4.38□□□□□ -1.71
C9orf3-205ENST00000427193 HOGA1Q86XE5 327 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 BATF2Q8N1L9 274 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 FAM216BQ8N7L0 139 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 ZNRF1Q8ND25 227 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 C19orf18Q8NEA5 215 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 OR5T2Q8NGG2 359 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 OR52I2Q8NH67 350 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 CCL13Q99616 98 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 HDHD3Q9BSH5 251 aaPredicted RBP4.38□□□□□ -1.71
C9orf3-205ENST00000427193 CHST6Q9GZX3 395 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 RIMS4Q9H426 269 aaPredicted RBP4.38□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF665Q9H7R5 613 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 ELL3Q9HB65 397 aaPredicted RBP4.38□□□□□ -1.71
C9orf3-205ENST00000427193 PATZ1Q9HBE1 687 aaKnown RBP4.38□□□□□ -1.71
C9orf3-205ENST00000427193 Q9N2K0 584 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 PALMDQ9NP74 551 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 KLK11Q9UBX7 282 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 OPN4Q9UHM6 478 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 AK3Q9UIJ7 227 aa4.38□□□□□ -1.71
C9orf3-205ENST00000427193 EPPK1P58107 5090 aaKnown RBP4.38□□□□□ -1.71
C9orf3-205ENST00000427193 IGHV4-30-2A0A087WSY4 118 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 PPIAL4CA0A0B4J2A2 164 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 IGHV4-61A0A0C4DH41 118 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 IGKV1-6A0A0C4DH72 117 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 ODAMA1E959 279 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 J3QRK9 145 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 SIRPB1O00241 398 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 SPINT2O43291 252 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 TCF21O43680 179 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 B3GALNT1O75752 331 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 UPK1BO75841 260 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 GYPAP02724 150 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 FCGR3AP08637 254 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 HOXB5P09067 269 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF735P0CB33 412 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 IL7P13232 177 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 IRF2P14316 349 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 GABRR1P24046 479 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 PRSS3P35030 304 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 BTCP35070 178 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 TALDO1P37837 337 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 MEF2CQ06413 473 aaPredicted RBP4.37□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF846Q147U1 533 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 HERPUD1Q15011 391 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 HMGN3Q15651 99 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 KCNJ8Q15842 424 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 C17orf58Q2M2W7 97 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 VAX1Q5SQQ9 334 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 WDR25Q64LD2 544 aaPredicted RBP4.37□□□□□ -1.71
C9orf3-205ENST00000427193 FIP1L1Q6UN15 594 aaKnown RBP4.37□□□□□ -1.71
C9orf3-205ENST00000427193 FAM131AQ6UXB0 335 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 GTSCR1Q86UQ5 136 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 Q8N402 240 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 FGFRL1Q8N441 504 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 BPIFB2Q8N4F0 458 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 SPICQ8N5J4 248 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.37□□□□□ -1.71
C9orf3-205ENST00000427193 C3orf56Q8N813 242 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 DEFB108BQ8NET1 73 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 OR5D13Q8NGL4 314 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 OR5R1Q8NH85 324 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 RAB1CQ92928 201 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 MRGPRFQ96AM1 343 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 NEDD4LQ96PU5 975 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms