RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 HIST2H2BCQ6DN03 193 aa12.33□□□□□ -0.44
GINS3-203ENST00000426538 THOC7Q6I9Y2 204 aaKnown RBP12.33□□□□□ -0.44
GINS3-203ENST00000426538 SIRT7Q9NRC8 400 aa12.33□□□□□ -0.44
GINS3-203ENST00000426538 IGHV2-70DA0A0C4DH43 119 aa12.32□□□□□ -0.44
GINS3-203ENST00000426538 COX7A1P24310 79 aa12.32□□□□□ -0.44
GINS3-203ENST00000426538 DLX1P56177 255 aa12.32□□□□□ -0.44
GINS3-203ENST00000426538 ZNF833PQ6ZTB9 187 aa12.32□□□□□ -0.44
GINS3-203ENST00000426538 LRRC75A-AS1Q8N1F1 130 aa12.32□□□□□ -0.44
GINS3-203ENST00000426538 PNKDQ8N490 385 aa12.32□□□□□ -0.44
GINS3-203ENST00000426538 ZBTB8BQ8NAP8 495 aaPredicted RBP12.32□□□□□ -0.44
GINS3-203ENST00000426538 BEND2Q8NDZ0 799 aa12.32□□□□□ -0.44
GINS3-203ENST00000426538 OR11H4Q8NGC9 324 aa12.32□□□□□ -0.44
GINS3-203ENST00000426538 THAP6Q8TBB0 222 aa12.32□□□□□ -0.44
GINS3-203ENST00000426538 LSM10Q969L4 123 aaKnown RBP12.32□□□□□ -0.44
GINS3-203ENST00000426538 ARHGAP32A7KAX9 2087 aa12.32□□□□□ -0.44
GINS3-203ENST00000426538 G3V3Q6 166 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 MPC2O95563 127 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 HPRT1P00492 218 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 KRASP01116 189 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 IGKV1-39P01597 117 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 IGKV1D-39P04432 117 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 BRWD1-AS2P59051 145 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 PAX2Q02962 417 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 FAM71F2Q6NXP2 309 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 LPAR2Q9HBW0 351 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 MMP26Q9NRE1 261 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 AMMECR1Q9Y4X0 333 aaPredicted RBP12.31□□□□□ -0.44
GINS3-203ENST00000426538 FBN2P35556 2912 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 FXYD6-FXYD2A0A087WZ82 144 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 FAM157AC9JC47 383 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 RBFOX2O43251 390 aaKnown RBP eCLIP12.31□□□□□ -0.44
GINS3-203ENST00000426538 SNAPC5O75971 98 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 S1PR2O95136 353 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 IGLV1-47P01700 117 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 RLN2P04090 185 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 PET100P0DJ07 73 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 CT45A6P0DMU7 189 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 CT45A5P0DMU8 189 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 CT45A7P0DMV0 189 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 USF1P22415 310 aaPredicted RBP12.31□□□□□ -0.44
GINS3-203ENST00000426538 ZNF137PP52743 207 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 PRB3Q04118 309 aaPredicted RBP12.31□□□□□ -0.44
GINS3-203ENST00000426538 HLA-DRB5Q30154 266 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 NMSQ5H8A3 153 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 C11orf87Q6NUJ2 197 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 OR4S2Q8NH73 311 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 DDB2Q92466 427 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 PLEKHA2Q9HB19 425 aa12.31□□□□□ -0.44
GINS3-203ENST00000426538 POLR3KQ9Y2Y1 108 aaPredicted RBP12.31□□□□□ -0.44
GINS3-203ENST00000426538 A0A1B0GU03 582 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 BUB1B-PAK6H3BSN5 160 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 TOX4O94842 621 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 SCGB1D2O95969 90 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 DVL1P1P54792 670 aaPredicted RBP12.3□□□□□ -0.44
GINS3-203ENST00000426538 S100A10P60903 97 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 TAGLNQ01995 201 aaKnown RBP12.3□□□□□ -0.44
GINS3-203ENST00000426538 RAB32Q13637 225 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 SMCO1Q147U7 214 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 RTL8BQ17RB0 113 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 VMO1Q7Z5L0 202 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 ZNF546Q86UE3 836 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 TGIF2LXQ8IUE1 241 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 FOXRED2Q8IWF2 684 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 ZNF383Q8NA42 475 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 ST6GALNAC6Q969X2 333 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 UNKLQ9H9P5 680 aaKnown RBP12.3□□□□□ -0.44
GINS3-203ENST00000426538 ZFP57Q9NU63 452 aa12.3□□□□□ -0.44
GINS3-203ENST00000426538 TRAV14DV4A0A0A6YYC5 116 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 HMSDA8MTL9 139 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 APOA2P02652 100 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 ARG1P05089 322 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 SLC25A6P12236 298 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 EPHA1P21709 976 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 G6PCP35575 357 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 REG1BP48304 166 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 IL15RAQ13261 267 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 FAM219AQ8IW50 185 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 OR11H6Q8NGC7 330 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 GRPEL2Q8TAA5 225 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 GPR146Q96CH1 333 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 PCGF1Q9BSM1 259 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 MMP24Q9Y5R2 645 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 ASH1LQ9NR48 2969 aaKnown RBP12.29□□□□□ -0.44
GINS3-203ENST00000426538 PTPN13Q12923 2485 aa12.29□□□□□ -0.44
GINS3-203ENST00000426538 ANKRD17O75179 2603 aaKnown RBP12.29□□□□□ -0.44
GINS3-203ENST00000426538 VPS13CQ709C8 3753 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 CRYZL1O95825 349 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 IGKV1-5P01602 117 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 RRASP10301 218 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 SLC25A4P12235 298 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 ERVK-16P61578 105 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 H2BFWTQ7Z2G1 175 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 DMBX1Q8NFW5 382 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 OR1S1Q8NH92 325 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 R3HDM4Q96D70 268 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 MBD6Q96DN6 1003 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 MRPL20Q9BYC9 149 aaKnown RBP12.28□□□□□ -0.44
GINS3-203ENST00000426538 SIRPDQ9H106 197 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 SLC35D1Q9NTN3 355 aa12.28□□□□□ -0.44
GINS3-203ENST00000426538 LSM5Q9Y4Y9 91 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms