RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 PCSK4Q6UW60 755 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 LINC00596Q86U02 117 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 LFNGQ8NES3 379 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 MRPL30Q8TCC3 161 aaKnown RBP10.98□□□□□ -0.65
COL12A1-205ENST00000425443 CORO2AQ92828 525 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 HIPK2Q9H2X6 1198 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 DLL3Q9NYJ7 618 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 GNG13Q9P2W3 67 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 RNF150Q9ULK6 438 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 ZNF320A2RRD8 509 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 KIAA1324LA8MWY0 1029 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-205ENST00000425443 J3QT63 122 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 HMGB3O15347 200 aaKnown RBP10.98□□□□□ -0.65
COL12A1-205ENST00000425443 TUSC2O75896 110 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 RIPPLY3P57055 190 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 UBE2KP61086 200 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 PPP1CBP62140 327 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 IL24Q13007 206 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 FAM53AQ6NSI3 398 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-205ENST00000425443 SHISA2Q6UWI4 295 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 Q6ZS49 121 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 C1QL4Q86Z23 238 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 LYG1Q8N1E2 194 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 SLC25A31Q9H0C2 315 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 KIAA1456Q9P272 454 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 MGAQ8IWI9 3026 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 TRAV24A0A0B4J272 114 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 NKX2-8O15522 239 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 VDAC1P21796 283 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 UCP1P25874 307 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 GMPPAQ96IJ6 420 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-205ENST00000425443 CHODLQ9H9P2 273 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 CLEC18AA5D8T8 446 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 CDIPTO14735 213 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 COMPP49747 757 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-205ENST00000425443 ARL16Q0P5N6 197 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 SRSF7Q16629 238 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL12A1-205ENST00000425443 OR8G2PQ6IF36 304 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 CLEC18CQ8NCF0 446 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 ST6GALNAC3Q8NDV1 305 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 OBP2BQ9NPH6 170 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 CACNG5Q9UF02 275 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 POLDIP2Q9Y2S7 368 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 OR2W1Q9Y3N9 320 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 WSB1Q9Y6I7 421 aa10.97□□□□□ -0.65
COL12A1-205ENST00000425443 RIF1Q5UIP0 2472 aaKnown RBP10.97□□□□□ -0.65
COL12A1-205ENST00000425443 KMT2EQ8IZD2 1858 aa10.96□□□□□ -0.65
COL12A1-205ENST00000425443 NKX6-3A6NJ46 265 aa10.96□□□□□ -0.65
COL12A1-205ENST00000425443 SS18L1O75177 396 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-205ENST00000425443 IGKV1-39P01597 117 aa10.96□□□□□ -0.65
COL12A1-205ENST00000425443 IGKV1D-39P04432 117 aa10.96□□□□□ -0.65
COL12A1-205ENST00000425443 ELLP55199 621 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-205ENST00000425443 RPL23AP62750 156 aaKnown RBP10.96□□□□□ -0.65
COL12A1-205ENST00000425443 HLA-DRB3P79483 266 aa10.96□□□□□ -0.65
COL12A1-205ENST00000425443 ZNF726P1Q15940 193 aa10.96□□□□□ -0.65
COL12A1-205ENST00000425443 STXBP6Q8NFX7 210 aa10.96□□□□□ -0.65
COL12A1-205ENST00000425443 GPR146Q96CH1 333 aa10.96□□□□□ -0.65
COL12A1-205ENST00000425443 PKIBQ9C010 78 aa10.96□□□□□ -0.65
COL12A1-205ENST00000425443 OR51I2Q9H344 312 aa10.96□□□□□ -0.65
COL12A1-205ENST00000425443 HIST1H2BKO60814 126 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 IGLV2-14P01704 120 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 HIST1H2BJP06899 126 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 HIST1H2BOP23527 126 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 HIST1H2BBP33778 126 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 HIST1H2BDP58876 126 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 HIST1H2BCP62807 126 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 HIST2H2BEQ16778 126 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 ZNF506Q5JVG8 444 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.96□□□□□ -0.66
COL12A1-205ENST00000425443 HIST1H2BHQ93079 126 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 PLPPR2Q96GM1 343 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 HIST1H2BNQ99877 126 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 HIST1H2BMQ99879 126 aa10.96□□□□□ -0.66
COL12A1-205ENST00000425443 TRGC2P03986 189 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 F2RP25116 425 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 RAB11AP62491 216 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 RPL19P84098 196 aaKnown RBP10.95□□□□□ -0.66
COL12A1-205ENST00000425443 ALKBH6Q3KRA9 238 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 HIST3H2BBQ8N257 126 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 SCCPDHQ8NBX0 429 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 DEFB124Q8NES8 71 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 SLC25A40Q8TBP6 338 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 PPIAL4AQ9Y536 164 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 NKX6-1P78426 367 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-205ENST00000425443 SPANXN5Q5MJ07 72 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 ZNF808Q8N4W9 903 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-205ENST00000425443 ATP5SQ99766 215 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 DMXL1Q9Y485 3027 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 SMG1Q96Q15 3661 aaKnown RBP10.95□□□□□ -0.66
COL12A1-205ENST00000425443 CYB5BO43169 146 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 IGHV1-2P23083 117 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 HAPLN4Q86UW8 402 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 FDCSPQ8NFU4 85 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 OR10V1Q8NGI7 309 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 ZNF665Q9H7R5 613 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 PLSCR4Q9NRQ2 329 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 FZR1Q9UM11 496 aa10.95□□□□□ -0.66
COL12A1-205ENST00000425443 TNRC6AQ8NDV7 1962 aaKnown RBP10.94□□□□□ -0.66
COL12A1-205ENST00000425443 SPAARA0A1B0GVQ0 90 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 LRP5LA4QPB2 252 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms