RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 DCUN1D5Q9BTE7 237 aa14.63□□□□□ -0.07
HDAC6-205ENST00000423941 C6orf62Q9GZU0 229 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-205ENST00000423941 RBM7Q9Y580 266 aaKnown RBP14.63□□□□□ -0.07
HDAC6-205ENST00000423941 GABARAPH6UMI1 98 aa14.62□□□□□ -0.07
HDAC6-205ENST00000423941 THBS3P49746 956 aa14.62□□□□□ -0.07
HDAC6-205ENST00000423941 ANK2Q01484 3957 aa14.62□□□□□ -0.07
HDAC6-205ENST00000423941 SRSF4Q08170 494 aaKnown RBP14.62□□□□□ -0.07
HDAC6-205ENST00000423941 PYHIN1Q6K0P9 492 aa14.62□□□□□ -0.07
HDAC6-205ENST00000423941 PDPNQ86YL7 162 aa14.62□□□□□ -0.07
HDAC6-205ENST00000423941 ADTRPQ96IZ2 230 aa14.62□□□□□ -0.07
HDAC6-205ENST00000423941 EHFQ9NZC4 300 aa14.62□□□□□ -0.07
HDAC6-205ENST00000423941 RBMX2Q9Y388 322 aaKnown RBP14.62□□□□□ -0.07
HDAC6-205ENST00000423941 SH2D7A6NKC9 451 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-205ENST00000423941 NCBP2LA6PVI3 153 aaKnown RBP14.61□□□□□ -0.07
HDAC6-205ENST00000423941 LINC00473A8K010 186 aa14.61□□□□□ -0.07
HDAC6-205ENST00000423941 PMP2P02689 132 aa14.61□□□□□ -0.07
HDAC6-205ENST00000423941 IGKV1-16P04430 117 aa14.61□□□□□ -0.07
HDAC6-205ENST00000423941 CNTFRP26992 372 aa14.61□□□□□ -0.07
HDAC6-205ENST00000423941 HRH1P35367 487 aa14.61□□□□□ -0.07
HDAC6-205ENST00000423941 SSBP1Q04837 148 aaKnown RBP14.61□□□□□ -0.07
HDAC6-205ENST00000423941 VAX1Q5SQQ9 334 aa14.61□□□□□ -0.07
HDAC6-205ENST00000423941 OR5H2Q8NGV7 314 aa14.61□□□□□ -0.07
HDAC6-205ENST00000423941 SMIM4Q8WVI0 70 aa14.61□□□□□ -0.07
HDAC6-205ENST00000423941 FCAMRQ8WWV6 532 aa14.61□□□□□ -0.07
HDAC6-205ENST00000423941 ZNF107Q9UII5 783 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-205ENST00000423941 J3QRK9 145 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 HAX1O00165 279 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 NBR2O15453 112 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 HLA-DMAP28067 261 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 VDAC2P45880 294 aaPredicted RBP14.6□□□□□ -0.07
HDAC6-205ENST00000423941 DGCR2P98153 550 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 MMDQ15546 238 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 TMEM95Q3KNT9 176 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 TMEM177Q53S58 311 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 KLHDC1Q8N7A1 406 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 ZBTB34Q8NCN2 500 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 MOB3AQ96BX8 217 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 SLC35D1Q9NTN3 355 aa14.6□□□□□ -0.07
HDAC6-205ENST00000423941 LINC01548A6NM66 108 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 H7C2Y5 167 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 RRHO14718 337 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 GSTZ1O43708 216 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-205ENST00000423941 APOA2P02652 100 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 CD74P04233 296 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 RRASP10301 218 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 TBPP20226 339 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 BRWD1-AS2P59051 145 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 RPL30P62888 115 aaKnown RBP14.59□□□□□ -0.07
HDAC6-205ENST00000423941 C5orf64Q2M2E5 130 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 TMEM229BQ8NBD8 167 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 OR6F1Q8NGZ6 308 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 HSD17B10Q99714 261 aaKnown RBP14.59□□□□□ -0.07
HDAC6-205ENST00000423941 CCL28Q9NRJ3 127 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 ZNF580Q9UK33 172 aa14.59□□□□□ -0.07
HDAC6-205ENST00000423941 FABP12A6NFH5 140 aa14.58□□□□□ -0.08
HDAC6-205ENST00000423941 SPDEFO95238 335 aa14.58□□□□□ -0.08
HDAC6-205ENST00000423941 IGLV2-23P01705 113 aa14.58□□□□□ -0.08
HDAC6-205ENST00000423941 HLA-DRB1P01911 266 aa14.58□□□□□ -0.08
HDAC6-205ENST00000423941 GNRHRP30968 328 aa14.58□□□□□ -0.08
HDAC6-205ENST00000423941 LGALS7P47929 136 aa14.58□□□□□ -0.08
HDAC6-205ENST00000423941 ACTBL2Q562R1 376 aa14.58□□□□□ -0.08
HDAC6-205ENST00000423941 ZNF66Q6ZN08 573 aa14.58□□□□□ -0.08
HDAC6-205ENST00000423941 CCDC190Q86UF4 302 aa14.58□□□□□ -0.08
HDAC6-205ENST00000423941 FLYWCH2Q96CP2 140 aaKnown RBP14.58□□□□□ -0.08
HDAC6-205ENST00000423941 RASL11BQ9BPW5 248 aa14.58□□□□□ -0.08
HDAC6-205ENST00000423941 ZNF2Q9BSG1 426 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-205ENST00000423941 SLC5A7Q9GZV3 580 aa14.58□□□□□ -0.08
HDAC6-205ENST00000423941 A6NHS1 94 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 CRYGBP07316 175 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 VSIG10L2P0DP72 767 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 ETV6P41212 452 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 IL18Q14116 193 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 PSG5Q15238 335 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 MFSD4AQ8N468 514 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 BVESQ8NE79 360 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 SECTM1Q8WVN6 248 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 TSNAXQ99598 290 aaKnown RBP14.57□□□□□ -0.08
HDAC6-205ENST00000423941 HSPB9Q9BQS6 159 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 V9GYH0 126 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 PLXNB1O43157 2135 aa14.57□□□□□ -0.08
HDAC6-205ENST00000423941 SRRM4A7MD48 611 aaKnown RBP14.56□□□□□ -0.08
HDAC6-205ENST00000423941 CD3DP04234 171 aa14.56□□□□□ -0.08
HDAC6-205ENST00000423941 IGF1P05019 195 aa14.56□□□□□ -0.08
HDAC6-205ENST00000423941 PTBP1P26599 531 aaKnown RBP eCLIP14.56□□□□□ -0.08
HDAC6-205ENST00000423941 UCP3P55916 312 aa14.56□□□□□ -0.08
HDAC6-205ENST00000423941 RTL8BQ17RB0 113 aa14.56□□□□□ -0.08
HDAC6-205ENST00000423941 RNASE12Q5GAN4 147 aaKnown RBP14.56□□□□□ -0.08
HDAC6-205ENST00000423941 C9orf152Q5JTZ5 239 aa14.56□□□□□ -0.08
HDAC6-205ENST00000423941 AADACL3Q5VUY0 350 aa14.56□□□□□ -0.08
HDAC6-205ENST00000423941 LIN54Q6MZP7 749 aa14.56□□□□□ -0.08
HDAC6-205ENST00000423941 SLC35E3Q7Z769 313 aa14.56□□□□□ -0.08
HDAC6-205ENST00000423941 LHFPL1Q86WI0 220 aa14.56□□□□□ -0.08
HDAC6-205ENST00000423941 IGHV7-81A0A0B4J1V7 117 aa14.55□□□□□ -0.08
HDAC6-205ENST00000423941 M0QYG6 137 aa14.55□□□□□ -0.08
HDAC6-205ENST00000423941 KCNAB3O43448 404 aa14.55□□□□□ -0.08
HDAC6-205ENST00000423941 FXYD4P59646 89 aa14.55□□□□□ -0.08
HDAC6-205ENST00000423941 HERV-K104P61576 105 aa14.55□□□□□ -0.08
HDAC6-205ENST00000423941 RPS16P62249 146 aaKnown RBP14.55□□□□□ -0.08
HDAC6-205ENST00000423941 ZNF79Q15937 498 aa14.55□□□□□ -0.08
HDAC6-205ENST00000423941 ZNF818PQ6ZRF7 136 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms