RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 LY6EQ16553 131 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 ZNF383Q8NA42 475 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 ZBTB34Q8NCN2 500 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 OR5AN1Q8NGI8 311 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 TERB2Q8NHR7 220 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 BORCS5Q969J3 196 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 MCUBQ9NWR8 336 aa13.62□□□□□ -0.23
COL7A1-202ENST00000422991 LINC00473A8K010 186 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 IGKV1D-33P01593 117 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 IGKV1-33P01594 117 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 FAM106CPP0CH98 169 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 EBI3Q14213 229 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 CCBE1Q6UXH8 406 aaPredicted RBP13.61□□□□□ -0.23
COL7A1-202ENST00000422991 LIAT1Q6ZQX7 453 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 TMEM219Q86XT9 240 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 SLC38A6Q8IZM9 456 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 BVESQ8NE79 360 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 DDB2Q92466 427 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 ADTRPQ96IZ2 230 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 AKR1E2Q96JD6 320 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 HSD17B10Q99714 261 aaKnown RBP13.61□□□□□ -0.23
COL7A1-202ENST00000422991 RSRP1Q9BUV0 290 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 SCP2D1Q9UJQ7 156 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 PITPNC1Q9UKF7 332 aa13.61□□□□□ -0.23
COL7A1-202ENST00000422991 RNF212BA8MTL3 300 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 GPR31O00270 319 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 CHST1O43916 411 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 PGAM2P15259 253 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 HES1Q14469 280 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 LPCAT3Q6P1A2 487 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 ZNF66Q6ZN08 573 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 IDO2Q6ZQW0 420 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 KCTD9Q7L273 389 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 Q8N6K4 173 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 OR13C8Q8NGS7 320 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 SPATA3Q8NHX4 192 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 TMEM158Q8WZ71 300 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 RBMXL1Q96E39 390 aaKnown RBP13.6□□□□□ -0.23
COL7A1-202ENST00000422991 EAF1Q96JC9 268 aaPredicted RBP13.6□□□□□ -0.23
COL7A1-202ENST00000422991 GPHA2Q96T91 129 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 WASHC3Q9Y3C0 194 aa13.6□□□□□ -0.23
COL7A1-202ENST00000422991 LINC00854A0A1B0GVQ3 168 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 NAP1L6A6NFF2 107 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 TNFSF12O43508 249 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 GPR137BO60478 399 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 UPK1BO75841 260 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 MOSP00540 346 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 APOA2P02652 100 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 TMEM11P17152 192 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 MC5RP33032 325 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 ECI1P42126 302 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 RPL30P62888 115 aaKnown RBP13.59□□□□□ -0.23
COL7A1-202ENST00000422991 SRSF2Q01130 221 aaKnown RBP13.59□□□□□ -0.23
COL7A1-202ENST00000422991 TAGLNQ01995 201 aaKnown RBP13.59□□□□□ -0.23
COL7A1-202ENST00000422991 SURF2Q15527 256 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-202ENST00000422991 CMTM1Q8IZ96 169 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 OR2T10Q8NGZ9 312 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 MARCH1Q8TCQ1 289 aa13.59□□□□□ -0.23
COL7A1-202ENST00000422991 C7orf50Q9BRJ6 194 aaKnown RBP13.59□□□□□ -0.23
COL7A1-202ENST00000422991 H7C2Y5 167 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 TRIM77I1YAP6 450 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 PLA2G10O15496 165 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 OR2F2O95006 317 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 HNF4GQ14541 408 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 PHLDA2Q53GA4 152 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 C16orf87Q6PH81 154 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 C16orf82Q7Z2V1 217 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 PDPNQ86YL7 162 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 ZFAND1Q8TCF1 268 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 TCTEX1D2Q8WW35 142 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 ZNF486Q96H40 463 aaPredicted RBP13.58□□□□□ -0.24
COL7A1-202ENST00000422991 RBM14Q96PK6 669 aaKnown RBP13.58□□□□□ -0.24
COL7A1-202ENST00000422991 SLC25A33Q9BSK2 321 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 SLC35D1Q9NTN3 355 aa13.58□□□□□ -0.24
COL7A1-202ENST00000422991 PGLYRP1O75594 196 aaPredicted RBP13.57□□□□□ -0.24
COL7A1-202ENST00000422991 IGKV1-16P04430 117 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 RLN1P04808 185 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 PI3P19957 117 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 BTCP35070 178 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 RND3P61587 244 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 CATR1Q13166 79 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 RTL8BQ17RB0 113 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 ZFAND2BQ8WV99 257 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 TSC22D3Q99576 134 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 RAB18Q9NP72 206 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 SLC2A9Q9NRM0 540 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 PRELID3BQ9Y3B1 194 aa13.57□□□□□ -0.24
COL7A1-202ENST00000422991 FAM181BA6NEQ2 426 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 CENPXA8MT69 81 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 LYRM1O43325 122 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 CTSDP07339 412 aaPredicted RBP13.56□□□□□ -0.24
COL7A1-202ENST00000422991 RRASP10301 218 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 S100GP29377 79 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 BRWD1-AS2P59051 145 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 RPL15P61313 204 aaKnown RBP13.56□□□□□ -0.24
COL7A1-202ENST00000422991 IFITM3Q01628 133 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 ABCA11PQ4W5N1 156 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 OR2B11Q5JQS5 317 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 OR51H1Q8NH63 302 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 RITA1Q96K30 269 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms