RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 LINC00312Q9Y6C7 94 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ZGRF1Q86YA3 2104 aa12.08□□□□□ -0.48
HLA-DPA1-242ENST00000419277 C17orf98A8MV24 154 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ST8SIA5O15466 376 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 HSPB1P04792 205 aaKnown RBP12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 G6PCP35575 357 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ASCL1P50553 236 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SLC38A11Q08AI6 406 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ZNF816Q0VGE8 651 aaPredicted RBP12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ZNF429Q86V71 674 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ZNRF1Q8ND25 227 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 R3HDM4Q96D70 268 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 GGACTQ9BVM4 153 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SCRT1Q9BWW7 348 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 WDR61Q9GZS3 305 aaKnown RBP12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 RBKSQ9H477 322 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 TMEM231Q9H6L2 316 aa12.07□□□□□ -0.48
HLA-DPA1-242ENST00000419277 H3BP45 60 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 AGPAT2O15120 278 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 OR4A8P0C604 315 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 METTL15P1P0C7V9 234 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 PPT1P50897 306 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 BSPH1Q075Z2 132 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 TMEM267Q0VDI3 215 aaPredicted RBP12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ADIPOQQ15848 244 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 FBXL19-AS1Q494R0 122 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 KHDC3LQ587J8 217 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SPANXN5Q5MJ07 72 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SP5Q6BEB4 398 aaPredicted RBP12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ALKBH2Q6NS38 261 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 TPRX1Q8N7U7 411 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 OR10P1Q8NGE3 313 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 GAFA1Q96PS6 74 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 S1PR3Q99500 378 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 MS4A5Q9H3V2 200 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 FBXO7Q9Y3I1 522 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 DYSFO75923 2080 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 DSCAMO60469 2012 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 LOC105371267A0A1B0GV96 52 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 RBFOX3A6NFN3 312 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 LINC00473A8K010 186 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 IAPPP10997 89 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ATF4P18848 351 aaPredicted RBP12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 BRWD1-AS2P59051 145 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SPCS3P61009 180 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 GNB2P62879 340 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 POU2AF1Q16633 256 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 VWC2Q2TAL6 325 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 WFDC8Q8IUA0 241 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 RFESDQ8TAC1 157 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 TUBA4BQ9H853 241 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SAP30LQ9HAJ7 183 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SMCO4Q9NRQ5 59 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 IDI2-AS1Q9NZ38 188 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 COQ3Q9NZJ6 369 aa12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 RP1L1Q8IWN7 2480 aaPredicted RBP12.06□□□□□ -0.48
HLA-DPA1-242ENST00000419277 CFAP47Q6ZTR5 3102 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 AKAP13Q12802 2813 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 IGHV3OR15-7A0A075B7D8 119 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 IGHV3-43A0A0B4J1X8 118 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 TRGV8A0A0C4DH27 118 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 DPRXA6NFQ7 191 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 NDUFA2O43678 99 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 MPDU1O75352 247 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 RBMXL2O75526 392 aaKnown RBP12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 NXPH3O95157 252 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 FSTL3O95633 263 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 IFNA1P01562 189 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 IGHV3-43DP0DP04 118 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 FHITP49789 147 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 EFNB3Q15768 340 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 C17orf58Q2M2W7 97 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ZNF506Q5JVG8 444 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 FAM71F2Q6NXP2 309 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 THNSL2Q86YJ6 484 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 MBD3L1Q8WWY6 194 aa12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 TAF15Q92804 592 aaKnown RBP eCLIP12.05□□□□□ -0.48
HLA-DPA1-242ENST00000419277 PTPRZ1P23471 2315 aaPredicted RBP12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 H7C2Y5 167 aa12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 M0R1X1 148 aa12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 C1QL1O75973 258 aa12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 THBDP07204 575 aa12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ATP5IP56385 69 aaPredicted RBP12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 FLI1Q01543 452 aaPredicted RBP12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 TMEM41BQ5BJD5 291 aa12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 PRAMEF5Q5TYX0 476 aa12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SPSB3Q6PJ21 355 aa12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 BTNL3Q6UXE8 466 aa12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 C8orf31Q8N9H6 132 aa12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 DDB2Q92466 427 aa12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 KCNIP2Q9NS61 270 aa12.04□□□□□ -0.48
HLA-DPA1-242ENST00000419277 FAM74A7A6NL05 159 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 HRASP01112 189 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ARG1P05089 322 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 DAOP14920 347 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ID4P47928 161 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 RUNX1Q01196 453 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 TLE1Q04724 770 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 IZUMO4Q1ZYL8 232 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms