RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RNF212BA8MTL3 300 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 C10orf142B7Z368 130 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 CLDN1O95832 211 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 IER3P46695 156 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 TFF3Q07654 80 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 THAP3Q8WTV1 239 aaPredicted RBP6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 APOBEC3DQ96AK3 386 aaPredicted RBP6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 CCDC74BQ96LY2 380 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 SFXN3Q9BWM7 321 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 QTRT1Q9BXR0 403 aaKnown RBP6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 GNB1LQ9BYB4 327 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 WNT10AQ9GZT5 417 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 MTIF3Q9H2K0 278 aaKnown RBP6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 GPR27Q9NS67 375 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 MRPL27Q9P0M9 148 aaKnown RBP6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 HS3ST3A1Q9Y663 406 aa6.78□□□□□ -1.32
HMGXB4-202ENST00000418170 OR5B21A6NL26 309 aa6.77□□□□□ -1.32
HMGXB4-202ENST00000418170 SYNGR3O43761 229 aa6.77□□□□□ -1.32
HMGXB4-202ENST00000418170 FBLP22087 321 aaKnown RBP6.77□□□□□ -1.32
HMGXB4-202ENST00000418170 YAF2Q8IY57 180 aa6.77□□□□□ -1.32
HMGXB4-202ENST00000418170 OR4F17Q8NGA8 305 aa6.77□□□□□ -1.32
HMGXB4-202ENST00000418170 OR1L1Q8NH94 360 aa6.77□□□□□ -1.32
HMGXB4-202ENST00000418170 OCC1Q8TAD7 63 aa6.77□□□□□ -1.32
HMGXB4-202ENST00000418170 SGCZQ96LD1 299 aa6.77□□□□□ -1.32
HMGXB4-202ENST00000418170 CHRNA10Q9GZZ6 450 aa6.77□□□□□ -1.32
HMGXB4-202ENST00000418170 ZNF391Q9UJN7 358 aa6.77□□□□□ -1.32
HMGXB4-202ENST00000418170 RNF24Q9Y225 148 aa6.77□□□□□ -1.32
HMGXB4-202ENST00000418170 IGLV3-32A0A0A0MS00 114 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 hCG_38984A0A1B0GV85 526 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 TMEM238C9JI98 176 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 TNFSF11O14788 317 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 CIDEAO60543 219 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF324O75467 553 aaPredicted RBP6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 THBS3P49746 956 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF83P51522 516 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 VAMP3Q15836 100 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 FAM27BQ5VT28 67 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 CLEC2AQ6UVW9 174 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 TXNDC17Q9BRA2 123 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 CLN8Q9UBY8 286 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 ERRFI1Q9UJM3 462 aaPredicted RBP6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF816-ZNF321PA0A0X1KG74 233 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 A0A1W2PRS3 328 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 C17orf112F2Z3M2 114 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 S1PR2O95136 353 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 FRMD6-AS1P0C7T7 363 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 PMCHP20382 165 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF585BQ52M93 769 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 NIT1Q86X76 327 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 PIGCQ92535 297 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 CLDN23Q96B33 292 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 RCHY1Q96PM5 261 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 IGHV3-20A0A0C4DH32 117 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 PMS2P5A8MQ11 134 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 IGLV2-14P01704 120 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 GFRA1P56159 465 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 PMCHL1Q16048 86 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 C19orf35Q6ZS72 473 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 MUC15Q8N387 334 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 RAB1CQ92928 201 aa6.77□□□□□ -1.33
HMGXB4-202ENST00000418170 F5P12259 2224 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 SPTY2D1-AS1A0A0U1RR47 76 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 SLC17A3O00476 420 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 HSPB6O14558 160 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 MT-ND6P03923 174 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 BCL3P20749 454 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 VWC2Q2TAL6 325 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 VHLLQ6RSH7 139 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 OR1F12Q8NHA8 337 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 SVIPQ8NHG7 77 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 NUDT11Q96G61 164 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF407Q9C0G0 2248 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 HSBP1L1C9JCN9 74 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 PTGDSP41222 190 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 FASLGP48023 281 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 FGF12P61328 243 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 PSG7Q13046 419 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 MAJINQ3KP22 176 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 LRRC10Q5BKY1 277 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 TMPRSS7Q7RTY8 843 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 LIN7CQ9NUP9 197 aaKnown RBP6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 CA2P00918 260 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 ARG2P78540 354 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 RPEL1Q2QD12 228 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 STUMQ69YW2 141 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 ST6GALNAC3Q8NDV1 305 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 OR10P1Q8NGE3 313 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF837Q96EG3 531 aaPredicted RBP6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 ULBP2Q9BZM5 246 aa6.76□□□□□ -1.33
HMGXB4-202ENST00000418170 K7EN84 100 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 KRTAP27-1Q3LI81 207 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 DCAF12Q5T6F0 453 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 RAET1LQ5VY80 246 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 C20orf204Q6ZNR8 217 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 MMD2Q8IY49 270 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 ATOH7Q8N100 152 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 OR4P4Q8NGL7 312 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 HS3ST6Q96QI5 342 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 SCO2A0A1W2PP80 73 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms