RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CDX2Q99626 313 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF8-203ENST00000417814 NUDT16L1Q9BRJ7 211 aaKnown RBP11.16□□□□□ -0.62
TNFRSF8-203ENST00000417814 M0R1X1 148 aa11.16□□□□□ -0.62
TNFRSF8-203ENST00000417814 EREGO14944 169 aa11.16□□□□□ -0.62
TNFRSF8-203ENST00000417814 ID3Q02535 119 aa11.16□□□□□ -0.62
TNFRSF8-203ENST00000417814 IL24Q13007 206 aa11.16□□□□□ -0.62
TNFRSF8-203ENST00000417814 RAB24Q969Q5 203 aa11.16□□□□□ -0.62
TNFRSF8-203ENST00000417814 SF3B5Q9BWJ5 86 aaKnown RBP11.16□□□□□ -0.62
TNFRSF8-203ENST00000417814 STRADBQ9C0K7 418 aa11.16□□□□□ -0.62
TNFRSF8-203ENST00000417814 IFNA1P01562 189 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 ATP5G3P48201 142 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 PPP1CBP62140 327 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 DBX2Q6ZNG2 339 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 C2orf88Q9BSF0 95 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 ANAPC10Q9UM13 185 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 TECTAO75443 2155 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 TRAV34A0A0B4J273 112 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 TOX3O15405 576 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 MPV17P39210 176 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 NUBP1P53384 320 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 NUTF2P61970 127 aaKnown RBP11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 NMSQ5H8A3 153 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 ACSM6Q6P461 480 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 ZCCHC24Q8N2G6 241 aaKnown RBP11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 NHLRC2Q8NBF2 726 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 GALMQ96C23 342 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 GPR87Q9BY21 358 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 TMEM9BQ9NQ34 198 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 ZNF391Q9UJN7 358 aa11.15□□□□□ -0.62
TNFRSF8-203ENST00000417814 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.15□□□□□ -0.631e-6■■■□□ 17.4
TNFRSF8-203ENST00000417814 LRP5LA4QPB2 252 aa11.15□□□□□ -0.63
TNFRSF8-203ENST00000417814 SH2D1BO14796 132 aa11.15□□□□□ -0.63
TNFRSF8-203ENST00000417814 NAPSAO96009 420 aa11.15□□□□□ -0.63
TNFRSF8-203ENST00000417814 UCP1P25874 307 aa11.15□□□□□ -0.63
TNFRSF8-203ENST00000417814 FKBP2P26885 142 aaKnown RBP11.15□□□□□ -0.63
TNFRSF8-203ENST00000417814 SOX8P57073 446 aa11.15□□□□□ -0.63
TNFRSF8-203ENST00000417814 TMEM41BQ5BJD5 291 aa11.15□□□□□ -0.63
TNFRSF8-203ENST00000417814 DCAF10Q5QP82 559 aa11.15□□□□□ -0.63
TNFRSF8-203ENST00000417814 ZNRF1Q8ND25 227 aa11.15□□□□□ -0.63
TNFRSF8-203ENST00000417814 NEU1Q99519 415 aa11.15□□□□□ -0.63
TNFRSF8-203ENST00000417814 IGLV3-32A0A0A0MS00 114 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 NEURL1O76050 574 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 FOXO1Q12778 655 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 OR8B8Q15620 311 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 TBC1D28Q2M2D7 210 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 PCSK4Q6UW60 755 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 DTD1Q8TEA8 209 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 TAF15Q92804 592 aaKnown RBP eCLIP11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 PARLQ9H300 379 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 ZNRD1Q9P1U0 126 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 SLC17A3O00476 420 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 TNFRSF9Q07011 255 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 RPL39P5Q59GN2 51 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 HAPLN4Q86UW8 402 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 ODF3L1Q8IXM7 274 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 HIST3H2BBQ8N257 126 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 OR4X1Q8NH49 305 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 FAM173AQ9BQD7 235 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 DDA1Q9BW61 102 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 RTL8AQ9BWD3 113 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 SCRT1Q9BWW7 348 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 CBLN4Q9NTU7 201 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 TP53TG5Q9Y2B4 290 aa11.14□□□□□ -0.63
TNFRSF8-203ENST00000417814 RELNP78509 3460 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 C11orf94C9JXX5 98 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 NKX2-8O15522 239 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 CER1O95813 267 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 HAND1O96004 215 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 HBZP02008 142 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 C1QTNF9P0C862 333 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 MGST1P10620 155 aaKnown RBP11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 ZNF83P51522 516 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 MIC13Q5XKP0 118 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 CARFQ8N187 725 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 RND1Q92730 232 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 WDR54Q9H977 334 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 IGHV3-21A0A0B4J1V1 117 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 LOC102723971A0A1B0GUV8 181 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 PTBP3O95758 552 aaKnown RBP11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 REG1BP48304 166 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 ZNF525Q8N782 197 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 OR10A7Q8NGE5 316 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 MALSU1Q96EH3 234 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 RAB40CQ96S21 281 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 C1QTNF5Q9BXJ0 243 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 LRP4O75096 1905 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 ODAMA1E959 279 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 RNFT1Q5M7Z0 435 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 OR5A2Q8NGI9 324 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 TUBG2Q9NRH3 451 aa11.13□□□□□ -0.63
TNFRSF8-203ENST00000417814 C12orf77C9JDV5 145 aa11.12□□□□□ -0.63
TNFRSF8-203ENST00000417814 H0Y980 276 aa11.12□□□□□ -0.63
TNFRSF8-203ENST00000417814 OR4A16Q8NH70 328 aa11.12□□□□□ -0.63
TNFRSF8-203ENST00000417814 COLQQ9Y215 455 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF8-203ENST00000417814 TRGV5A0A0B4J1U4 118 aa11.12□□□□□ -0.63
TNFRSF8-203ENST00000417814 IGLV3-1P01715 115 aa11.12□□□□□ -0.63
TNFRSF8-203ENST00000417814 OR10J4P0C629 311 aa11.12□□□□□ -0.63
TNFRSF8-203ENST00000417814 LHX2P50458 406 aa11.12□□□□□ -0.63
TNFRSF8-203ENST00000417814 MEF2BQ02080 365 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF8-203ENST00000417814 MRPL49Q13405 166 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms