RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 GABRA6Q16445 453 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 ALKBH2Q6NS38 261 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 OR5T1Q8NG75 326 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 OR10G9Q8NGN4 311 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 OR10G7Q8NGN6 311 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 DTD1Q8TEA8 209 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 NINJ1Q92982 152 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 GMPPAQ96IJ6 420 aaPredicted RBP12.11□□□□□ -0.47
HDAC9-208ENST00000417496 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.11□□□□□ -0.47
HDAC9-208ENST00000417496 DCHS1Q96JQ0 3298 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 RP1L1Q8IWN7 2480 aaPredicted RBP12.11□□□□□ -0.47
HDAC9-208ENST00000417496 ICE1Q9Y2F5 2266 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 PMS2P5A8MQ11 134 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 RNF212BA8MTL3 300 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
HDAC9-208ENST00000417496 LY86O95711 162 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 P0C879 139 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 EIF4EBP1Q13541 118 aaPredicted RBP12.11□□□□□ -0.47
HDAC9-208ENST00000417496 FFAR4Q5NUL3 377 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 C16orf82Q7Z2V1 217 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 OR4F5Q8NH21 305 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 OR4F4Q96R69 305 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 P2RX4Q99571 388 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 ELOVL1Q9BW60 279 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 HES4Q9HCC6 221 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 PSG11Q9UQ72 335 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 DMXL1Q9Y485 3027 aa12.11□□□□□ -0.47
HDAC9-208ENST00000417496 PHOX2AO14813 284 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 SOX8P57073 446 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 EDDM3AQ14507 147 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 Q3ZCU0 254 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 GCSAMLQ5JQS6 135 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 NCR3LG1Q68D85 454 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 VWA1Q6PCB0 445 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 OR10P1Q8NGE3 313 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 FAM234AQ9H0X4 552 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 ZDHHC11Q9H8X9 412 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 TMEM242Q9NWH2 141 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 AURKAIP1Q9NWT8 199 aaPredicted RBP12.1□□□□□ -0.47
HDAC9-208ENST00000417496 OOEPA6NGQ2 149 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 EGR1P18146 543 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 COL8A2P25067 703 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 COL10A1Q03692 680 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 MSMO1Q15800 293 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 TMEM241Q24JQ0 296 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 WDR82Q6UXN9 313 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 SSX9Q7RTT3 188 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 H2BFWTQ7Z2G1 175 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 PARLQ9H300 379 aa12.1□□□□□ -0.47
HDAC9-208ENST00000417496 FAM90A26D6RGX4 464 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 PAGE4O60829 102 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 IFNA1P01562 189 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 SP9P0CG40 484 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 GZMHP20718 246 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 ACP7Q6ZNF0 438 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 VKORC1L1Q8N0U8 176 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 PFDN5Q99471 154 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 GAB2Q9UQC2 676 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 DMRT1Q9Y5R6 373 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 TIMM8AO60220 97 aaPredicted RBP12.09□□□□□ -0.47
HDAC9-208ENST00000417496 CCL11P51671 97 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 RPL23P62829 140 aaKnown RBP12.09□□□□□ -0.47
HDAC9-208ENST00000417496 FOXF2Q12947 444 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 FAM214BQ7L5A3 538 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 OR51G1Q8NGK1 321 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 OR13D1Q8NGV5 346 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 OR4X1Q8NH49 305 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 NPCDR1Q9BY65 106 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 NAT8Q9UHE5 227 aa12.09□□□□□ -0.47
HDAC9-208ENST00000417496 C1QTNF9BB2RNN3 333 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 NKX2-8O15522 239 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 OPN1MWP04001 364 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 OPN1MW2P0DN77 364 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 OPN1MW3P0DN78 364 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 PSMB3P49720 205 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 BSXQ3C1V8 233 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 SLC35E4Q6ICL7 350 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 FIP1L1Q6UN15 594 aaKnown RBP12.08□□□□□ -0.48
HDAC9-208ENST00000417496 TMEM147Q9BVK8 224 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 QTRT1Q9BXR0 403 aaKnown RBP12.08□□□□□ -0.48
HDAC9-208ENST00000417496 LAMP3Q9UQV4 416 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 MGAQ8IWI9 3026 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 TRBV24-1A0A075B6N3 115 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 MARCH11A6NNE9 402 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 PROP1O75360 226 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 TNFSF10P50591 281 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 CATR1Q13166 79 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 CYP2G1PQ6ZSU1 146 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 Q6ZT83 130 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 RHOVQ96L33 236 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 AGMATQ9BSE5 352 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 PARD6GQ9BYG4 376 aaPredicted RBP12.08□□□□□ -0.48
HDAC9-208ENST00000417496 PRDM13Q9H4Q3 707 aa12.08□□□□□ -0.48
HDAC9-208ENST00000417496 CACNA1HO95180 2353 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 TRAV38-1A0A0B4J264 116 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 KBTBD11O94819 623 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 CRYAAP02489 173 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
HDAC9-208ENST00000417496 GAMTQ14353 236 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms