RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 PROP1O75360 226 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 GSTT2P0CG29 244 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 GSTT2BP0CG30 244 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 TALDO1P37837 337 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 ARFRP1Q13795 201 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 ECSCRQ19T08 205 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 AKIRIN2Q53H80 203 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 IGSF11Q5DX21 431 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 NR2C2APQ86WQ0 139 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 PDPNQ86YL7 162 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 ZNF383Q8NA42 475 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 ATG5Q9H1Y0 275 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.66■□□□□ 0.749e-6■□□□□ 9.4
VEGFA-208ENST00000417285 SSR3Q9UNL2 185 aa19.66■□□□□ 0.74
VEGFA-208ENST00000417285 A0A1W2PN81 502 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 SPDEFO95238 335 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 EGR2P11161 476 aaPredicted RBP19.65■□□□□ 0.74
VEGFA-208ENST00000417285 CD40LGP29965 261 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 CHRNA7P36544 502 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 GNB1P62873 340 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 NDPQ00604 133 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 PSG5Q15238 335 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 ZNF429Q86V71 674 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 TPRA1Q86W33 373 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 ABHD5Q8WTS1 349 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 OR5B12Q96R08 314 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 METTL1Q9UBP6 276 aaKnown RBP19.65■□□□□ 0.74
VEGFA-208ENST00000417285 FBXO7Q9Y3I1 522 aa19.65■□□□□ 0.74
VEGFA-208ENST00000417285 TRBV6-7A0A0A0MS04 114 aa19.64■□□□□ 0.73
VEGFA-208ENST00000417285 SMIM30A4D0T7 59 aa19.64■□□□□ 0.73
VEGFA-208ENST00000417285 M0R1X1 148 aa19.64■□□□□ 0.73
VEGFA-208ENST00000417285 OR8U9P0C7N5 309 aa19.64■□□□□ 0.73
VEGFA-208ENST00000417285 RPS16P62249 146 aaKnown RBP19.64■□□□□ 0.73
VEGFA-208ENST00000417285 SRSF7Q16629 238 aaKnown RBP eCLIP19.64■□□□□ 0.737e-11■□□□□ 10.2
VEGFA-208ENST00000417285 ZNF773Q6PK81 442 aa19.64■□□□□ 0.73
VEGFA-208ENST00000417285 PPP1R27Q86WC6 154 aa19.64■□□□□ 0.73
VEGFA-208ENST00000417285 MAFIPQ8WZ33 124 aa19.64■□□□□ 0.73
VEGFA-208ENST00000417285 OR2D2Q9H210 308 aa19.64■□□□□ 0.73
VEGFA-208ENST00000417285 ZNF230Q9UIE0 474 aaPredicted RBP19.64■□□□□ 0.73
VEGFA-208ENST00000417285 GAB2Q9UQC2 676 aa19.64■□□□□ 0.73
VEGFA-208ENST00000417285 ZNF256Q9Y2P7 627 aaPredicted RBP19.64■□□□□ 0.73
VEGFA-208ENST00000417285 DNAH9Q9NYC9 4486 aa19.63■□□□□ 0.73
VEGFA-208ENST00000417285 SOX15O60248 233 aa19.63■□□□□ 0.73
VEGFA-208ENST00000417285 IGKV1-16P04430 117 aa19.63■□□□□ 0.73
VEGFA-208ENST00000417285 ACTBL2Q562R1 376 aa19.63■□□□□ 0.73
VEGFA-208ENST00000417285 ASPHD1Q5U4P2 390 aa19.63■□□□□ 0.73
VEGFA-208ENST00000417285 FLYWCH2Q96CP2 140 aaKnown RBP19.63■□□□□ 0.73
VEGFA-208ENST00000417285 PRR25Q96S07 402 aa19.63■□□□□ 0.73
VEGFA-208ENST00000417285 GINS4Q9BRT9 223 aa19.63■□□□□ 0.73
VEGFA-208ENST00000417285 SLC35D1Q9NTN3 355 aa19.63■□□□□ 0.73
VEGFA-208ENST00000417285 RBM7Q9Y580 266 aaKnown RBP19.63■□□□□ 0.73
VEGFA-208ENST00000417285 A3GALT2U3KPV4 340 aa19.63■□□□□ 0.73
VEGFA-208ENST00000417285 OVOL1O14753 267 aa19.62■□□□□ 0.73
VEGFA-208ENST00000417285 LINC00205P59089 165 aa19.62■□□□□ 0.73
VEGFA-208ENST00000417285 UNQ5815/PRO19632Q6UWF5 114 aa19.62■□□□□ 0.73
VEGFA-208ENST00000417285 Q6ZS49 121 aa19.62■□□□□ 0.73
VEGFA-208ENST00000417285 DCUN1D4Q92564 292 aa19.62■□□□□ 0.73
VEGFA-208ENST00000417285 WWC2-AS2Q96NR7 200 aa19.62■□□□□ 0.73
VEGFA-208ENST00000417285 CLCC1Q96S66 551 aa19.62■□□□□ 0.73
VEGFA-208ENST00000417285 SLA2Q9H6Q3 261 aa19.62■□□□□ 0.73
VEGFA-208ENST00000417285 LINC01619G3V211 115 aa19.61■□□□□ 0.73
VEGFA-208ENST00000417285 ARPC1BO15143 372 aaKnown RBP19.61■□□□□ 0.73
VEGFA-208ENST00000417285 SCGNO76038 276 aa19.61■□□□□ 0.73
VEGFA-208ENST00000417285 LGALS1P09382 135 aaKnown RBP19.61■□□□□ 0.73
VEGFA-208ENST00000417285 DTYMKP23919 212 aa19.61■□□□□ 0.73
VEGFA-208ENST00000417285 LGALS7P47929 136 aa19.61■□□□□ 0.73
VEGFA-208ENST00000417285 TAGLNQ01995 201 aaKnown RBP19.61■□□□□ 0.73
VEGFA-208ENST00000417285 SDHAF2Q9NX18 166 aa19.61■□□□□ 0.73
VEGFA-208ENST00000417285 DAPK2Q9UIK4 370 aa19.61■□□□□ 0.73
VEGFA-208ENST00000417285 CA2P00918 260 aa19.6■□□□□ 0.73
VEGFA-208ENST00000417285 CBX3Q13185 183 aa19.6■□□□□ 0.73
VEGFA-208ENST00000417285 CDNFQ49AH0 187 aa19.6■□□□□ 0.73
VEGFA-208ENST00000417285 LFNGQ8NES3 379 aa19.6■□□□□ 0.73
VEGFA-208ENST00000417285 RRP15Q9Y3B9 282 aaKnown RBP19.6■□□□□ 0.73
VEGFA-208ENST00000417285 SFXN4Q6P4A7 337 aa19.59■□□□□ 0.73
VEGFA-208ENST00000417285 DLX4Q92988 240 aaPredicted RBP19.59■□□□□ 0.73
VEGFA-208ENST00000417285 OR51E2Q9H255 320 aa19.59■□□□□ 0.73
VEGFA-208ENST00000417285 TPSG1Q9NRR2 321 aa19.59■□□□□ 0.73
VEGFA-208ENST00000417285 SLC25A17O43808 307 aa19.58■□□□□ 0.72
VEGFA-208ENST00000417285 HSPB1P04792 205 aaKnown RBP19.58■□□□□ 0.72
VEGFA-208ENST00000417285 FXYD3Q14802 87 aa19.58■□□□□ 0.72
VEGFA-208ENST00000417285 HACD4Q5VWC8 232 aa19.58■□□□□ 0.72
VEGFA-208ENST00000417285 ARPC1AQ92747 370 aa19.58■□□□□ 0.72
VEGFA-208ENST00000417285 FAM103A1Q9BTL3 118 aaKnown RBP19.58■□□□□ 0.72
VEGFA-208ENST00000417285 ALX4Q9H161 411 aaPredicted RBP19.58■□□□□ 0.72
VEGFA-208ENST00000417285 ELF5Q9UKW6 265 aaPredicted RBP19.58■□□□□ 0.72
VEGFA-208ENST00000417285 SORL1Q92673 2214 aa19.57■□□□□ 0.72
VEGFA-208ENST00000417285 SNRPBP14678 240 aaKnown RBP19.57■□□□□ 0.72
VEGFA-208ENST00000417285 SDC2P34741 201 aa19.57■□□□□ 0.72
VEGFA-208ENST00000417285 PITPNAQ00169 270 aa19.57■□□□□ 0.72
VEGFA-208ENST00000417285 RTL8BQ17RB0 113 aa19.57■□□□□ 0.72
VEGFA-208ENST00000417285 H1FOOQ8IZA3 346 aaPredicted RBP19.57■□□□□ 0.72
VEGFA-208ENST00000417285 CASTOR1Q8WTX7 329 aa19.57■□□□□ 0.72
VEGFA-208ENST00000417285 RHOVQ96L33 236 aa19.57■□□□□ 0.72
VEGFA-208ENST00000417285 TMEM68Q96MH6 324 aa19.57■□□□□ 0.72
VEGFA-208ENST00000417285 U3KQK5 164 aa19.57■□□□□ 0.72
VEGFA-208ENST00000417285 STAB2Q8WWQ8 2551 aa19.57■□□□□ 0.72
VEGFA-208ENST00000417285 IGKV1D-8A0A087WSZ0 117 aa19.56■□□□□ 0.72
VEGFA-208ENST00000417285 SAP30O75446 220 aa19.56■□□□□ 0.72
VEGFA-208ENST00000417285 CNIH1O95406 144 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms