RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 LINC01561Q8N1V8 128 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 PRSS35Q8N3Z0 413 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF676Q8N7Q3 588 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR52E2Q8NGJ4 325 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR10G4Q8NGN3 311 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR2A1Q8NGT9 310 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR2AE1Q8NHA4 323 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 TERB2Q8NHR7 220 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 PFN4Q8NHR9 129 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR8D1Q8WZ84 308 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 AQP3Q92482 292 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 RGP1Q92546 391 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 TMEM106AQ96A25 262 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 C2orf50Q96LR7 162 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 NOL4LQ96MY1 436 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 PFDN5Q99471 154 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC6A7Q99884 636 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF2Q9BSG1 426 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 RNF126Q9BV68 326 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 GGACTQ9BVM4 153 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 ACTR3CQ9C0K3 210 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 CHST5Q9GZS9 411 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC35B3Q9H1N7 401 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 PATZ1Q9HBE1 687 aaKnown RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 TAF9BQ9HBM6 251 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 GHRLQ9UBU3 117 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 TAC3Q9UHF0 121 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 CD84Q9UIB8 345 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 TP53TG5Q9Y2B4 290 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 IER3IP1Q9Y5U9 82 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 KCNE3Q9Y6H6 103 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 CASP8AP2Q9UKL3 1982 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 HELZP42694 1942 aaKnown RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 COL4A2P08572 1712 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 A0A1B0GV72 72 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 A0A1B0GV90 55 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 A0A1B0GWA3 101 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 C7orf77A4D0Y5 90 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF860A6NHJ4 632 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 HIDE1A8MVS5 230 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 UMAD1C9J7I0 102 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 TCAPO15273 167 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC31A1O15431 190 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 GPR75O95800 540 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 MRPL3P09001 348 aaKnown RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR8U8P0C7N1 319 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC35G6P0C7Q6 338 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 CPMP14384 443 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 PGAM2P15259 253 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 FOLR1P15328 257 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 MUC1P15941 1255 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 AK4P27144 223 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 GNRHRP30968 328 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 RPL4P36578 427 aaKnown RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 SNCAP37840 140 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 IDH3GP51553 393 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 MFGE8Q08431 387 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 SRSF9Q13242 221 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 SKP2Q13309 424 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 PPP1R1AQ13522 171 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 RAB31Q13636 194 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 KLF5Q13887 457 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 ATXN7L3Q14CW9 347 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 RSU1Q15404 277 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 DUSP5Q16690 384 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 HAGHQ16775 308 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 MS4A18Q3C1V0 323 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 TMEM176BQ3YBM2 270 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR2B11Q5JQS5 317 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 WDR25Q64LD2 544 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 TCEAL6Q6IPX3 200 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 LEG1Q6P5S2 330 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 DHRS11Q6UWP2 260 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 HEPN1Q6WQI6 88 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 TMEM144Q7Z5S9 345 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 TMED4Q7Z7H5 227 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 LYPD6Q86Y78 171 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 CMTM1Q8IZ96 169 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 FAM71E2Q8N5Q1 922 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 KLHDC1Q8N7A1 406 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 COX18Q8N8Q8 333 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 LRTM2Q8N967 370 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 VN1R2Q8NFZ6 395 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR51D1Q8NGF3 324 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR10W1Q8NGF6 305 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR5AR1Q8NGP9 310 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR13C8Q8NGS7 320 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR9A2Q8NGT5 310 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR10R2Q8NGX6 335 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR10X1Q8NGY0 326 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR51A7Q8NH64 312 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OTOSQ8NHW6 89 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 DCUN1D4Q92564 292 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 KLK6Q92876 244 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 NTNG2Q96CW9 530 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZMYND19Q96E35 227 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 ABHD14BQ96IU4 210 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 TMEM56Q96MV1 263 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 YPEL4Q96NS1 127 aa2.91□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR2V2Q96R30 315 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms