RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CLCC1Q96S66 551 aa8.79□□□□□ -1
RFFL-204ENST00000414419 GPR61Q9BZJ8 451 aa8.79□□□□□ -1
RFFL-204ENST00000414419 SPATA2Q9UM82 520 aa8.79□□□□□ -1
RFFL-204ENST00000414419 IGKV1D-8A0A087WSZ0 117 aa8.78□□□□□ -1
RFFL-204ENST00000414419 A0A0A6YYH2 397 aa8.78□□□□□ -1
RFFL-204ENST00000414419 A6NJ64 397 aa8.78□□□□□ -1
RFFL-204ENST00000414419 G3V318 75 aa8.78□□□□□ -1
RFFL-204ENST00000414419 J3QRK9 145 aa8.78□□□□□ -1
RFFL-204ENST00000414419 SPDEFO95238 335 aa8.78□□□□□ -1
RFFL-204ENST00000414419 IGKV1-16P04430 117 aa8.78□□□□□ -1
RFFL-204ENST00000414419 RRASP10301 218 aa8.78□□□□□ -1
RFFL-204ENST00000414419 PSMB8P28062 276 aa8.78□□□□□ -1
RFFL-204ENST00000414419 CD40LGP29965 261 aa8.78□□□□□ -1
RFFL-204ENST00000414419 LUMP51884 338 aaPredicted RBP8.78□□□□□ -1
RFFL-204ENST00000414419 RAB25P57735 213 aa8.78□□□□□ -1
RFFL-204ENST00000414419 LINC00205P59089 165 aa8.78□□□□□ -1
RFFL-204ENST00000414419 ARPC4P59998 168 aa8.78□□□□□ -1
RFFL-204ENST00000414419 CX3CL1P78423 397 aa8.78□□□□□ -1
RFFL-204ENST00000414419 CFHR3Q02985 330 aa8.78□□□□□ -1
RFFL-204ENST00000414419 PSG5Q15238 335 aa8.78□□□□□ -1
RFFL-204ENST00000414419 RTL8BQ17RB0 113 aa8.78□□□□□ -1
RFFL-204ENST00000414419 CNIH2Q6PI25 160 aa8.78□□□□□ -1
RFFL-204ENST00000414419 LCNL1Q6ZST4 164 aa8.78□□□□□ -1
RFFL-204ENST00000414419 MRPL41Q8IXM3 137 aaKnown RBP8.78□□□□□ -1
RFFL-204ENST00000414419 LINC00482Q8N8I6 264 aa8.78□□□□□ -1
RFFL-204ENST00000414419 RNF152Q8N8N0 203 aa8.78□□□□□ -1
RFFL-204ENST00000414419 DPF1Q92782 380 aa8.78□□□□□ -1
RFFL-204ENST00000414419 YIPF6Q96EC8 236 aa8.78□□□□□ -1
RFFL-204ENST00000414419 S100A16Q96FQ6 103 aaKnown RBP8.78□□□□□ -1
RFFL-204ENST00000414419 ADTRPQ96IZ2 230 aa8.78□□□□□ -1
RFFL-204ENST00000414419 MCRIP2Q9BUT9 160 aaKnown RBP8.78□□□□□ -1
RFFL-204ENST00000414419 NECAP2Q9NVZ3 263 aa8.78□□□□□ -1
RFFL-204ENST00000414419 A3GALT2U3KPV4 340 aa8.78□□□□□ -1
RFFL-204ENST00000414419 A0A1W2PN81 502 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 CCL24O00175 119 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 SHOXO15266 292 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 SLC22A5O76082 557 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 CNIH1O95406 144 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 CHRNA7P36544 502 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 TGFBR1P36897 503 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 RPS19P39019 145 aaKnown RBP8.77□□□□□ -1.01
RFFL-204ENST00000414419 LGALS7P47929 136 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 FOXB2Q5VYV0 432 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 ZNF562Q6V9R5 426 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 TCTEX1D1Q8N7M0 179 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 BVESQ8NE79 360 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 SLC25A38Q96DW6 304 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 HARBI1Q96MB7 349 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 DUX3Q96PT4 197 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 ANXA10Q9UJ72 324 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 OR2W1Q9Y3N9 320 aa8.77□□□□□ -1.01
RFFL-204ENST00000414419 FCN1O00602 326 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 SLC25A17O43808 307 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 SSX5O60225 188 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 CA2P00918 260 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 PRB2P02812 416 aaPredicted RBP8.76□□□□□ -1.01
RFFL-204ENST00000414419 NFYAP23511 347 aaPredicted RBP8.76□□□□□ -1.01
RFFL-204ENST00000414419 PPIFP30405 207 aaKnown RBP8.76□□□□□ -1.01
RFFL-204ENST00000414419 RAB9AP51151 201 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 UBE2NLQ5JXB2 153 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 UNQ5815/PRO19632Q6UWF5 114 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 ETV3LQ6ZN32 361 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 PPP1R27Q86WC6 154 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 ZNF645Q8N7E2 425 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 BEST4Q8NFU0 473 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 C4orf3Q8WVX3 66 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 RAX2Q96IS3 184 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 UBE2E2Q96LR5 201 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 P2RX4Q99571 388 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 FOXA2Q9Y261 457 aaPredicted RBP8.76□□□□□ -1.01
RFFL-204ENST00000414419 VSIG4Q9Y279 399 aa8.76□□□□□ -1.01
RFFL-204ENST00000414419 XRCC3O43542 346 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 TUSC2O75896 110 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 IGLV1-40P01703 118 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 HLA-DQB1P01920 261 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 DUTP33316 252 aaKnown RBP8.75□□□□□ -1.01
RFFL-204ENST00000414419 CBX5P45973 191 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 GNB1P62873 340 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 NDPQ00604 133 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 FXYD3Q14802 87 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 DEFB136Q30KP8 78 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 VMA21Q3ZAQ7 101 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 AKIRIN2Q53H80 203 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 TMEM177Q53S58 311 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 ACTBL2Q562R1 376 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 TMEM69Q5SWH9 247 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 PYHIN1Q6K0P9 492 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 HOGA1Q86XE5 327 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 SAMD12Q8N8I0 201 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 MINDY2Q8NBR6 621 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 LFNGQ8NES3 379 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 OR5M8Q8NGP6 311 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 MRAPQ8TCY5 172 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 ARPC1AQ92747 370 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 KCTD12Q96CX2 325 aaKnown RBP8.75□□□□□ -1.01
RFFL-204ENST00000414419 DCUN1D5Q9BTE7 237 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 FAM103A1Q9BTL3 118 aaKnown RBP8.75□□□□□ -1.01
RFFL-204ENST00000414419 FUNDC2Q9BWH2 189 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 KLK15Q9H2R5 256 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 AUNIPQ9H7T9 357 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms