RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 BCL2P10415 239 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 CCR2P41597 374 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 THBS3P49746 956 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 NUDT2P50583 147 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 SUB1P53999 127 aaKnown RBP eCLIP2.93□□□□□ -1.94
SF3B1-203ENST00000414174 AKR1C1Q04828 323 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 CATR1Q13166 79 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 KLRD1Q13241 179 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF141Q15928 474 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 CTF1Q16619 201 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 TMEM183BQ1AE95 376 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 C12orf74Q32Q52 190 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 TDRG1Q3Y452 100 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 Q499Y3 187 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ALG10Q5BKT4 473 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF506Q5JVG8 444 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 OR4C11Q6IEV9 310 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 KCTD18Q6PI47 426 aaPredicted RBP2.93□□□□□ -1.94
SF3B1-203ENST00000414174 SBSNQ6UWP8 590 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 TMEM207Q6UWW9 146 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 HEPN1Q6WQI6 88 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 TEX43Q6ZNM6 134 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 Q6ZRU5 148 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 P2RY8Q86VZ1 359 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 FTMTQ8N4E7 242 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 TEX29Q8N6K0 151 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 GVQW1Q8N7I0 195 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 OR2A1Q8NGT9 310 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 C10orf82Q8WW14 230 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 TSLPQ969D9 159 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF501Q96CX3 271 aaPredicted RBP2.93□□□□□ -1.94
SF3B1-203ENST00000414174 YPEL4Q96NS1 127 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 KXD1Q9BQD3 176 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 TM2D2Q9BX73 214 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 GNB1LQ9BYB4 327 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 HEBP1Q9NRV9 189 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 MARCH5Q9NX47 278 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 UQCR10Q9UDW1 63 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 TRMT112Q9UI30 125 aaKnown RBP2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF257Q9Y2Q1 563 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ORC6Q9Y5N6 252 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 MPC1Q9Y5U8 109 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 ENPP4Q9Y6X5 453 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 PLXND1Q9Y4D7 1925 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 FOCADQ5VW36 1801 aa2.93□□□□□ -1.94
SF3B1-203ENST00000414174 RPRD2Q5VT52 1461 aaKnown RBP2.92□□□□□ -1.94
SF3B1-203ENST00000414174 KAT6AQ92794 2004 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 IGLV3-22A0A075B6J6 115 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 TRBV5-5A0A0J9YX44 114 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 TCRBV3S1A0A5B6 114 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 BBIP1A8MTZ0 92 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 J3QQQ9 107 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 WNT9BO14905 357 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 RER1O15258 196 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HIST1H2BKO60814 126 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 PGLYRP1O75594 196 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-203ENST00000414174 OR2A4O95047 310 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 EPPINO95925 133 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 IGKV1D-16P01601 117 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HIST1H2BJP06899 126 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 PGA4P0DJD7 388 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 PGA3P0DJD8 388 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 ADCYAP1P18509 176 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HIST1H2BOP23527 126 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 NFYBP25208 207 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HIST1H2BBP33778 126 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF93P35789 620 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-203ENST00000414174 SNCAP37840 140 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 LPAR6P43657 344 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF83P51522 516 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HNRNPA3P51991 378 aaKnown RBP2.92□□□□□ -1.94
SF3B1-203ENST00000414174 SLC18A1P54219 525 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 NDUFV3P56181 108 aaKnown RBP2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HIST1H2BDP58876 126 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HIST1H2BCP62807 126 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 RIGQ13278 110 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 MMDQ15546 238 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 OR7A5Q15622 319 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HIST2H2BEQ16778 126 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 MIDNQ504T8 468 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 MS4A13Q5J8X5 152 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF626Q68DY1 528 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 Q6AWC8 147 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 DNAJC24Q6P3W2 148 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 UNQ5815/PRO19632Q6UWF5 114 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 AMTNQ6UX39 209 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 TMEM14EPQ6UXP3 125 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 SLC25A26Q70HW3 274 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 LRRTM1Q86UE6 522 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 LHFPL1Q86WI0 220 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 SFTPA1Q8IWL2 248 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 PRR22Q8IZ63 422 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 ZCCHC24Q8N2G6 241 aaKnown RBP2.92□□□□□ -1.94
SF3B1-203ENST00000414174 KCNRGQ8N5I3 272 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF441Q8N8Z8 693 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 OR51G1Q8NGK1 321 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 SSC4DQ8WTU2 575 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 RTN4IP1Q8WWV3 396 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HIST1H2BHQ93079 126 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms