RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 VAX1Q5SQQ9 334 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 UBAC2Q8NBM4 344 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 FAM216AQ8WUB2 273 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 ZDHHC16Q969W1 377 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 NTNG2Q96CW9 530 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 WDR89Q96FK6 387 aaPredicted RBP7.27□□□□□ -1.25
SYNE1-211ENST00000413186 PLSCR3Q9NRY6 295 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 MED13Q9UHV7 2174 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 A1L4Q6 167 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 CCSO14618 274 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 SYNGR1O43759 233 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 RAB9AP51151 201 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 FAM162BQ5T6X4 162 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF474Q6S9Z5 364 aaPredicted RBP7.27□□□□□ -1.25
SYNE1-211ENST00000413186 OR10V1Q8NGI7 309 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 GRAMD2BQ96HH9 432 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF488Q96MN9 340 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 KCNK15Q9H427 330 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 INTS1Q8N201 2190 aaKnown RBP7.27□□□□□ -1.25
SYNE1-211ENST00000413186 COL10A1Q03692 680 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 RPEL1Q2QD12 228 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 TMEM30BQ3MIR4 351 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 SFTA2Q6UW10 78 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 BTNL8Q6UX41 500 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF826PQ6ZT77 177 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 CIB3Q96Q77 187 aaPredicted RBP7.27□□□□□ -1.25
SYNE1-211ENST00000413186 NMES1Q9C002 83 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 CBLN4Q9NTU7 201 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 COL5A1P20908 1838 aaPredicted RBP7.27□□□□□ -1.25
SYNE1-211ENST00000413186 A6NDN8 102 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 E9PQ18 207 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF205O95201 554 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 RPS16P62249 146 aaKnown RBP7.27□□□□□ -1.25
SYNE1-211ENST00000413186 RAB11AP62491 216 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 FAM90A1Q86YD7 464 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 LYG1Q8N1E2 194 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 SLC35G3Q8N808 338 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 RGP1Q92546 391 aaPredicted RBP7.27□□□□□ -1.25
SYNE1-211ENST00000413186 SOX7Q9BT81 388 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 NPFFR1Q9GZQ6 430 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF355PQ9NSJ1 428 aa7.27□□□□□ -1.25
SYNE1-211ENST00000413186 IGHV3OR15-7A0A075B7D8 119 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 M0R3E3 92 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 HRASP01112 189 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 PTHLHP12272 177 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 KIR2DS2P43631 304 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 SUB1P53999 127 aaKnown RBP eCLIP7.26□□□□□ -1.25
SYNE1-211ENST00000413186 P2RX3P56373 397 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 PPP1R1AQ13522 171 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 C3orf36Q3SXR2 165 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 FA2HQ7L5A8 372 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 HOGA1Q86XE5 327 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 GCSAMQ8N6F7 178 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 OR52B4Q8NGK2 314 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 FGFBP3Q8TAT2 258 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 AQP3Q92482 292 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 CCL13Q99616 98 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 TOLLIPQ9H0E2 274 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 HEYLQ9NQ87 328 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-211ENST00000413186 PLSCR2Q9NRY7 297 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 CACNA1AO00555 2505 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 TRIM77I1YAP6 450 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 IGHV3-13P01766 116 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 CT45A6P0DMU7 189 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 CT45A5P0DMU8 189 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 CT45A7P0DMV0 189 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 PMELP40967 661 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 ERVS71-1P61550 626 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 CT45A1Q5HYN5 189 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 CT45A3Q8NHU0 189 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 SLC25A38Q96DW6 304 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 IL36GQ9NZH8 169 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 PSG11Q9UQ72 335 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 ACACBO00763 2458 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 TMEM14DPA8MWL7 114 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 K7EQM0 130 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 CLDN1O95832 211 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 OR2H2O95918 312 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 MPV17P39210 176 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 VMA21Q3ZAQ7 101 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 CYB5R2Q6BCY4 276 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 PRSS54Q6PEW0 395 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 POC1AQ8NBT0 407 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 ZBTB34Q8NCN2 500 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 TMEM106BQ9NUM4 274 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 HEATR1Q9H583 2144 aaKnown RBP7.26□□□□□ -1.25
SYNE1-211ENST00000413186 GYPAP02724 150 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 BRS3P32247 399 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 EFNB2P52799 333 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF324BQ6AW86 544 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-211ENST00000413186 AMMECR1LQ6DCA0 310 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 MOB3BQ86TA1 216 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 UBE2E2Q96LR5 201 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 Q96M66 194 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 COMMD5Q9GZQ3 224 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 OPN4Q9UHM6 478 aa7.26□□□□□ -1.25
SYNE1-211ENST00000413186 FER1L5A0AVI2 2057 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 UMAD1C9J7I0 102 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 ISLRO14498 428 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 LANCL1O43813 399 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms