RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 OVOL3O00110 214 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 RAB29O14966 203 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 PPIHO43447 177 aaKnown RBP7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 F12P00748 615 aaPredicted RBP7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 IL6RP08887 468 aaPredicted RBP7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 C4BPBP20851 252 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 UBA52P62987 128 aaKnown RBP7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 EWSR1Q01844 656 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 CATR1Q13166 79 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 GPR157Q5UAW9 335 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 WDR25Q64LD2 544 aaPredicted RBP7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 VKORC1L1Q8N0U8 176 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 OR2C3Q8N628 320 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 STOML3Q8TAV4 291 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 ST6GALNAC6Q969X2 333 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 SPIN2AQ99865 258 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 SPIN2BQ9BPZ2 258 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 RBKSQ9H477 322 aa7.04□□□□□ -1.28
HMGN1P34-201ENST00000413023 TANC2Q9HCD6 1990 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 A0A087X0M5 115 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 A0A1B0GX30 115 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 SRRM4A7MD48 611 aaKnown RBP7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 J3QR06 171 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 WRBO00258 174 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 FGF16O43320 207 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 TXNL1O43396 289 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 IGHV1-8P0DP01 117 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 MMP9P14780 707 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 RAB7AP51149 207 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 LDLRAD2Q5SZI1 272 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 THOC7Q6I9Y2 204 aaKnown RBP7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 ZNF833PQ6ZTB9 187 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 BAP18Q8IXM2 172 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 TCTEX1D1Q8N7M0 179 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 Q8N7P7 452 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 C8orf46Q8TAG6 207 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 FAM216AQ8WUB2 273 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 R3HDM4Q96D70 268 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 RITA1Q96K30 269 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 SMIM8Q96KF7 97 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 QTRT1Q9BXR0 403 aaKnown RBP7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 GAL3ST2Q9H3Q3 398 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 PATZ1Q9HBE1 687 aaKnown RBP7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 BARX1Q9HBU1 254 aaPredicted RBP7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 LYRM2Q9NU23 88 aaPredicted RBP7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 ZFP57Q9NU63 452 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 NBASA2RRP1 2371 aa7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 DIDO1Q9BTC0 2240 aaKnown RBP7.03□□□□□ -1.28
HMGN1P34-201ENST00000413023 SPTA1P02549 2419 aa7.02□□□□□ -1.28
HMGN1P34-201ENST00000413023 PKDREJQ9NTG1 2253 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 TPRP12270 2363 aaKnown RBP7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 ANKRD34BA5PLL1 514 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 TOR1AO14656 332 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 TAAR5O14804 337 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 SYNGR2O43760 224 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 CST7O76096 145 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 HPRT1P00492 218 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 PET100P0DJ07 73 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 IAPPP10997 89 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 MYOD1P15172 320 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 ZFP36P26651 326 aaKnown RBP7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 NUP62P37198 522 aaPredicted RBP7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 AKR1C2P52895 323 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 RELBQ01201 579 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 TMEM30BQ3MIR4 351 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 AARDQ4LEZ3 155 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 SPINK9Q5DT21 86 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 SSX9Q7RTT3 188 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 ABHD12Q8N2K0 398 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 LINC00311Q8N616 119 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 TMED6Q8WW62 240 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 RAB1CQ92928 201 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 NEIL1Q96FI4 390 aaPredicted RBP7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 OR4C12Q96R67 309 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 S1PR3Q99500 378 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 MRPL20Q9BYC9 149 aaKnown RBP7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 NARFLQ9H6Q4 476 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 RAB9BQ9NP90 201 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 COA4Q9NYJ1 87 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 HSPB7Q9UBY9 170 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 MIOXQ9UGB7 285 aa7.02□□□□□ -1.29
HMGN1P34-201ENST00000413023 HIVEP3Q5T1R4 2406 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 TRBV23-1A0A0A0MS06 115 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 PPIAL4CA0A0B4J2A2 164 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 MARCH11A6NNE9 402 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 PMS2P5A8MQ11 134 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 LY6LH3BQJ8 138 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 RBFOX2O43251 390 aaKnown RBP eCLIP7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 IGHV4-39P01824 125 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 GAPDHP04406 335 aaKnown RBP7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 PPIAL4GP0DN37 164 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 RRASP10301 218 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 TPT1P13693 172 aaKnown RBP7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 REG1BP48304 166 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 THBS3P49746 956 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 CAV2P51636 162 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 DYNLT3P51808 116 aa7.01□□□□□ -1.29
HMGN1P34-201ENST00000413023 EFNA4P52798 201 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms