RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 RRASP10301 218 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 S100GP29377 79 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 LINC00205P59089 165 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 DEFA1P59665 94 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 DEFA3P59666 94 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 BAMBIQ13145 260 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 TCTEX1D1Q8N7M0 179 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 SIGLECL1Q8N7X8 197 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 DUSP18Q8NEJ0 188 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 OR5R1Q8NH85 324 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 RNF5Q99942 180 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 DPAGT1Q9H3H5 408 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 SLC2A9Q9NRM0 540 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 COPZ2Q9P299 210 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 VSIG4Q9Y279 399 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 POMT1Q9Y6A1 747 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 NSD1Q96L73 2696 aaPredicted RBP12.21□□□□□ -0.45
LSM5-207ENST00000410044 MPPED1O15442 326 aa12.21□□□□□ -0.45
LSM5-207ENST00000410044 VENTXO95231 258 aa12.21□□□□□ -0.45
LSM5-207ENST00000410044 TCRBP04435 133 aa12.21□□□□□ -0.45
LSM5-207ENST00000410044 RAB13P51153 203 aa12.21□□□□□ -0.45
LSM5-207ENST00000410044 PIGPP57054 158 aa12.21□□□□□ -0.45
LSM5-207ENST00000410044 BRWD1-AS2P59051 145 aa12.21□□□□□ -0.45
LSM5-207ENST00000410044 CATR1Q13166 79 aa12.21□□□□□ -0.45
LSM5-207ENST00000410044 DCTN2Q13561 401 aaKnown RBP12.21□□□□□ -0.45
LSM5-207ENST00000410044 KCTD9Q7L273 389 aa12.21□□□□□ -0.45
LSM5-207ENST00000410044 DRAXINQ8NBI3 349 aaPredicted RBP12.21□□□□□ -0.45
LSM5-207ENST00000410044 ZNF418Q8TF45 676 aaPredicted RBP12.21□□□□□ -0.45
LSM5-207ENST00000410044 SSMEM1Q8WWF3 244 aa12.21□□□□□ -0.45
LSM5-207ENST00000410044 C14orf166Q9Y224 244 aaKnown RBP12.21□□□□□ -0.45
LSM5-207ENST00000410044 PRELID3BQ9Y3B1 194 aa12.21□□□□□ -0.45
LSM5-207ENST00000410044 FAM240BA0A1B0GVZ2 78 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 RNF212BA8MTL3 300 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 CLDN34H7C241 214 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 RBFOX2O43251 390 aaKnown RBP eCLIP12.2□□□□□ -0.46
LSM5-207ENST00000410044 FAM106CPP0CH98 169 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 PI3P19957 117 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 F2RP25116 425 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 KIR2DS2P43631 304 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 DHODHQ02127 395 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 ABCA11PQ4W5N1 156 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 PHLDA2Q53GA4 152 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 RBMS3Q6XE24 437 aaKnown RBP12.2□□□□□ -0.46
LSM5-207ENST00000410044 GLDNQ6ZMI3 551 aaPredicted RBP12.2□□□□□ -0.46
LSM5-207ENST00000410044 PDPNQ86YL7 162 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 Q8N6K4 173 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 CCDC71LQ8N9Z2 235 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 POC5Q8NA72 575 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 OR2T10Q8NGZ9 312 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 ALX4Q9H161 411 aaPredicted RBP12.2□□□□□ -0.46
LSM5-207ENST00000410044 SLC35D1Q9NTN3 355 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 TCF19Q9Y242 345 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 WASHC3Q9Y3C0 194 aa12.2□□□□□ -0.46
LSM5-207ENST00000410044 IGHV3-72A0A0B4J1Y9 119 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 A6NDX4 124 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 H3BUX3 64 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 HOXA3O43365 443 aaPredicted RBP12.19□□□□□ -0.46
LSM5-207ENST00000410044 TNFSF12O43508 249 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 B3GALNT1O75752 331 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 IGHV4-59P01825 116 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 APOA2P02652 100 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 SNRNP70P08621 437 aaKnown RBP12.19□□□□□ -0.46
LSM5-207ENST00000410044 MECP2P51608 486 aaKnown RBP12.19□□□□□ -0.46
LSM5-207ENST00000410044 HILS1P60008 231 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 TMEM177Q53S58 311 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 DHRS7BQ6IAN0 325 aaPredicted RBP12.19□□□□□ -0.46
LSM5-207ENST00000410044 TBC1D26Q86UD7 250 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 CD300LFQ8TDQ1 290 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 CAPSLQ8WWF8 208 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 TMEM230Q96A57 120 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 EAF1Q96JC9 268 aaPredicted RBP12.19□□□□□ -0.46
LSM5-207ENST00000410044 JMJD8Q96S16 334 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 GPHA2Q96T91 129 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 OCEL1Q9H607 264 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 PITPNC1Q9UKF7 332 aa12.19□□□□□ -0.46
LSM5-207ENST00000410044 CRYM-AS1A6NIL9 109 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 MOSP00540 346 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 IGKV1D-33P01593 117 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 IGKV1-33P01594 117 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 RLN1P04808 185 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 SLC9A3R2Q15599 337 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 RTL8BQ17RB0 113 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 TMEM128Q5BJH2 165 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 CCBE1Q6UXH8 406 aaPredicted RBP12.18□□□□□ -0.46
LSM5-207ENST00000410044 LIAT1Q6ZQX7 453 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 SLC25A42Q86VD7 318 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 ADAD2Q8NCV1 583 aaKnown RBP12.18□□□□□ -0.46
LSM5-207ENST00000410044 OR4C13Q8NGP0 309 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 TCTEX1D2Q8WW35 142 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 GALNT14Q96FL9 552 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 NUBP2Q9Y5Y2 271 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 MTORP42345 2549 aa12.18□□□□□ -0.46
LSM5-207ENST00000410044 BTBD17A6NE02 478 aa12.17□□□□□ -0.46
LSM5-207ENST00000410044 FCGR3BO75015 233 aa12.17□□□□□ -0.46
LSM5-207ENST00000410044 CD24P25063 80 aa12.17□□□□□ -0.46
LSM5-207ENST00000410044 LGALS7P47929 136 aa12.17□□□□□ -0.46
LSM5-207ENST00000410044 TAS2R31P59538 309 aa12.17□□□□□ -0.46
LSM5-207ENST00000410044 UBE2MP61081 183 aaKnown RBP12.17□□□□□ -0.46
LSM5-207ENST00000410044 ZNF585BQ52M93 769 aa12.17□□□□□ -0.46
LSM5-207ENST00000410044 FBLN7Q53RD9 439 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms