RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 S100A12P80511 92 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 TNFAIP6P98066 277 aaPredicted RBP3.19□□□□□ -1.9
LSM5-205ENST00000409952 DEFA6Q01524 100 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 CAV1Q03135 178 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 PRSS54Q6PEW0 395 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 BAP18Q8IXM2 172 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 AMN1Q8IY45 258 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 SMIM20Q8N5G0 67 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 MIR7-3HGQ8N6C7 128 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 LINC00612Q8N6U2 182 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 OR11H1Q8NG94 326 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 OR8B12Q8NGG6 310 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 OR11H2Q8NH07 326 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 KLF6Q99612 283 aaPredicted RBP3.19□□□□□ -1.9
LSM5-205ENST00000409952 PLA2G12AQ9BZM1 189 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 PLA2G2FQ9BZM2 168 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 UQCC1Q9NVA1 299 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 RPS6KB2Q9UBS0 482 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 ZNF230Q9UIE0 474 aaPredicted RBP3.19□□□□□ -1.9
LSM5-205ENST00000409952 PYCARDQ9ULZ3 195 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 NDUFAF1Q9Y375 327 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 MED1Q15648 1581 aaPredicted RBP3.19□□□□□ -1.9
LSM5-205ENST00000409952 PBRM1Q86U86 1689 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 DHX57Q6P158 1386 aaKnown RBP3.18□□□□□ -1.9
LSM5-205ENST00000409952 IGLV3-10A0A075B6K4 115 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 IGKV1-12A0A0C4DH73 117 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 CCNKO75909 580 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 S1PR2O95136 353 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 PDYNP01213 254 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 IGKV1D-12P01611 117 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 HLA-DRB1P01911 266 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 GYPCP04921 128 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 NBEAP1P0C6P0 100 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 SULT1A3P0DMM9 295 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 SULT1A4P0DMN0 295 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 ZNF19P17023 458 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 DSCR10P59022 87 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 HOXC5Q00444 222 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 NDPQ00604 133 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 IL15RAQ13261 267 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 ENDOGQ14249 297 aaKnown RBP3.18□□□□□ -1.9
LSM5-205ENST00000409952 KCNJ8Q15842 424 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 UMODL1-AS1Q8N2C9 162 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 ANKRD29Q8N6D5 301 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 ZNF433Q8N7K0 673 aaPredicted RBP3.18□□□□□ -1.9
LSM5-205ENST00000409952 SPANXA2-OT1Q8N9U9 137 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 ZFP62Q8NB50 900 aaPredicted RBP3.18□□□□□ -1.9
LSM5-205ENST00000409952 OR10A6Q8NH74 314 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 GNPDA2Q8TDQ7 276 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 CT55Q8WUE5 264 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 RMI2Q96E14 147 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 GNPNAT1Q96EK6 184 aaPredicted RBP3.18□□□□□ -1.9
LSM5-205ENST00000409952 PYURFQ96I23 114 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 TBX5Q99593 518 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 CCL13Q99616 98 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 RNF5Q99942 180 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 GINS3Q9BRX5 216 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 CXorf21Q9HAI6 301 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 RPS10P5Q9NQ39 176 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 PRTFDC1Q9NRG1 225 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 KCNIP2Q9NS61 270 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 TAS2R7Q9NYW3 318 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 COQ4Q9Y3A0 265 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 MEGF6O75095 1541 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 NOTCH3Q9UM47 2321 aa3.18□□□□□ -1.9
LSM5-205ENST00000409952 ABCA7Q8IZY2 2146 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 MIA3Q5JRA6 1907 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 LINC00862A6NCI5 91 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 IGLL5B9A064 214 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 IGKV3-15P01624 115 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 SERPINE1P05121 402 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 CD7P09564 240 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 IDO1P14902 403 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 PPP1CCP36873 323 aaKnown RBP3.17□□□□□ -1.9
LSM5-205ENST00000409952 FGF12P61328 243 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 BSPH1Q075Z2 132 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 C9orf64Q5T6V5 341 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 NANOGP8Q6NSW7 305 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 ZNF664Q8N3J9 261 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 OR11H6Q8NGC7 330 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 KLK6Q92876 244 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 ABCG5Q9H222 651 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 MIXL1Q9H2W2 232 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 GPR84Q9NQS5 396 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 CISHQ9NSE2 258 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 TAAR3PQ9P1P4 343 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 GTF3C1Q12789 2109 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 IGSF9BQ9UPX0 1349 aa3.17□□□□□ -1.9
LSM5-205ENST00000409952 TOP2BQ02880 1626 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 IGLV4-69A0A075B6H9 119 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 LHBP01229 141 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 GUSBP08236 651 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 LINC00869P0C866 280 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 ZNF133P52736 654 aaPredicted RBP3.16□□□□□ -1.9
LSM5-205ENST00000409952 TBPL2Q6SJ96 375 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 TMPPEQ6ZT21 453 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 GOLT1AQ6ZVE7 132 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 GRINAQ7Z429 371 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 SGPP2Q8IWX5 399 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 MKXQ8IYA7 352 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms