RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 SLC13A5Q86YT5 568 aaPredicted RBP0.65□□□□□ -2.31
PMS1-203ENST00000409593 PPWD1Q96BP3 646 aaKnown RBP0.65□□□□□ -2.31
PMS1-203ENST00000409593 OR51B6Q9H340 312 aa0.65□□□□□ -2.31
PMS1-203ENST00000409593 MRASO14807 208 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 NPYP01303 97 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 HBZP02008 142 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 OR10J1P30954 320 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 HERVK_113P63121 156 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 LGALS9BQ3B8N2 356 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 MESTQ5EB52 335 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 ATP5L2Q7Z4Y8 100 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 SPATA12Q7Z6I5 190 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 RPS19BP1Q86WX3 136 aaKnown RBP0.64□□□□□ -2.31
PMS1-203ENST00000409593 NATD1Q8N6N6 113 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 SLC7A6Q92536 515 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 ZNF514Q96K75 400 aaPredicted RBP0.64□□□□□ -2.31
PMS1-203ENST00000409593 UBQLN4Q9NRR5 601 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 GRIN2BQ13224 1484 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 KMT2DO14686 5537 aa0.64□□□□□ -2.31
PMS1-203ENST00000409593 LIN7AO14910 233 aaPredicted RBP0.63□□□□□ -2.31
PMS1-203ENST00000409593 KLRC4O43908 158 aa0.63□□□□□ -2.31
PMS1-203ENST00000409593 NDUFB2O95178 105 aa0.63□□□□□ -2.31
PMS1-203ENST00000409593 IFNGR2P38484 337 aa0.63□□□□□ -2.31
PMS1-203ENST00000409593 RAB8AP61006 207 aa0.63□□□□□ -2.31
PMS1-203ENST00000409593 SCGB1D4Q6XE38 83 aa0.63□□□□□ -2.31
PMS1-203ENST00000409593 ZNF705AQ6ZN79 300 aaPredicted RBP0.63□□□□□ -2.31
PMS1-203ENST00000409593 SLC36A1Q7Z2H8 476 aa0.63□□□□□ -2.31
PMS1-203ENST00000409593 PACRGLQ8N7B6 248 aa0.63□□□□□ -2.31
PMS1-203ENST00000409593 ODF3Q96PU9 254 aa0.63□□□□□ -2.31
PMS1-203ENST00000409593 ADAT1Q9BUB4 502 aaKnown RBP0.63□□□□□ -2.31
PMS1-203ENST00000409593 MED9Q9NWA0 146 aa0.63□□□□□ -2.31
PMS1-203ENST00000409593 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.63□□□□□ -2.31
PMS1-203ENST00000409593 IGKV1-9A0A0C4DH69 117 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 PLA2G10O15496 165 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 CCDC172P0C7W6 258 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 RBM11P57052 281 aaKnown RBP0.62□□□□□ -2.31
PMS1-203ENST00000409593 DAD1P61803 113 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 EMX1Q04741 257 aaPredicted RBP0.62□□□□□ -2.31
PMS1-203ENST00000409593 C15orf53Q8NAA6 179 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 GNB1LQ9BYB4 327 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 CHD2O14647 1828 aaKnown RBP0.62□□□□□ -2.31
PMS1-203ENST00000409593 BRWD1Q9NSI6 2320 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 HEATR5BQ9P2D3 2071 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 HMSDA8MTL9 139 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 F5H5K5 113 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 CIAO1O76071 339 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 RPSAP08865 295 aaKnown RBP0.62□□□□□ -2.31
PMS1-203ENST00000409593 GABRA2P47869 451 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 EXOC3L4Q17RC7 722 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 SPATA31B1PQ5VZV4 182 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 C7orf65Q6ZTY9 151 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 RORBQ92753 470 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 CCDC124Q96CT7 223 aaKnown RBP0.62□□□□□ -2.31
PMS1-203ENST00000409593 SMIM12Q96EX1 92 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 MSANTD3Q96H12 275 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 SERPINB11Q96P15 392 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 OR7D2Q96RA2 312 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 HBEGFQ99075 208 aa0.62□□□□□ -2.31
PMS1-203ENST00000409593 NCOA6Q14686 2063 aaPredicted RBP0.61□□□□□ -2.31
PMS1-203ENST00000409593 CRATP43155 626 aa0.61□□□□□ -2.31
PMS1-203ENST00000409593 STX3Q13277 289 aa0.61□□□□□ -2.31
PMS1-203ENST00000409593 OR4D1Q15615 310 aa0.61□□□□□ -2.31
PMS1-203ENST00000409593 LYZL1Q6UWQ5 148 aa0.61□□□□□ -2.31
PMS1-203ENST00000409593 OR1L8Q8NGR8 309 aa0.61□□□□□ -2.31
PMS1-203ENST00000409593 OR13C8Q8NGS7 320 aa0.61□□□□□ -2.31
PMS1-203ENST00000409593 TMA16Q96EY4 203 aaKnown RBP0.61□□□□□ -2.31
PMS1-203ENST00000409593 SFRP2Q96HF1 295 aa0.61□□□□□ -2.31
PMS1-203ENST00000409593 TMEM208Q9BTX3 173 aa0.61□□□□□ -2.31
PMS1-203ENST00000409593 TIMM9Q9Y5J7 89 aa0.61□□□□□ -2.31
PMS1-203ENST00000409593 HCRTO43612 131 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 MPZL2O60487 215 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 FADS2O95864 444 aaKnown RBP0.6□□□□□ -2.31
PMS1-203ENST00000409593 SERPINA7P05543 415 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 LCN1P31025 176 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 CD79BP40259 229 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 RPL27AP46776 148 aaKnown RBP0.6□□□□□ -2.31
PMS1-203ENST00000409593 AQP4P55087 323 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 DLX6P56179 175 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 TMEM267Q0VDI3 215 aaPredicted RBP0.6□□□□□ -2.31
PMS1-203ENST00000409593 MOGQ16653 247 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 DEFB115Q30KQ5 88 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 BAP18Q8IXM2 172 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 LRRC34Q8IZ02 419 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 MBD3L1Q8WWY6 194 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 TTTY13Q9BZ97 58 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 POFUT2Q9Y2G5 429 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 C22orf24Q9Y442 160 aa0.6□□□□□ -2.31
PMS1-203ENST00000409593 SLC35E2BP0CK96 405 aa0.59□□□□□ -2.31
PMS1-203ENST00000409593 PVALBP20472 110 aaPredicted RBP0.59□□□□□ -2.31
PMS1-203ENST00000409593 BTN3A2P78410 334 aa0.59□□□□□ -2.31
PMS1-203ENST00000409593 LRRC75BQ2VPJ9 315 aa0.59□□□□□ -2.31
PMS1-203ENST00000409593 C1orf174Q8IYL3 243 aa0.59□□□□□ -2.31
PMS1-203ENST00000409593 TMEM222Q9H0R3 208 aa0.59□□□□□ -2.31
PMS1-203ENST00000409593 POLR3HQ9Y535 204 aaPredicted RBP0.59□□□□□ -2.31
PMS1-203ENST00000409593 KIAA0232Q92628 1395 aa0.59□□□□□ -2.31
PMS1-203ENST00000409593 NPATQ14207 1427 aa0.59□□□□□ -2.31
PMS1-203ENST00000409593 COPEO14579 308 aa0.59□□□□□ -2.32
PMS1-203ENST00000409593 Q1T7F1 81 aa0.59□□□□□ -2.32
PMS1-203ENST00000409593 DYNC2LI1Q8TCX1 351 aa0.59□□□□□ -2.32
PMS1-203ENST00000409593 TLCD1Q96CP7 247 aa0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms